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+ . /work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189/bin:/opt/java/openjdk/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(jenkins-ares_multi_pipeline-main-189) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ CMAKE_PREFIX_PATH=/work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189:/opt/boost
+ export CMAKE_PREFIX_PATH
+ bash build.sh --python --use-system-boost=/opt/boost --use-system-fftw --use-system-hdf5 --native --purge --extra-flags -DINSTALL_PYTHON_LOCAL=OFF
Ensure the current directory is ARES
Summary of CMAKE_FLAGS:
   -DBUILD_PYTHON_EXTENSION:BOOL=ON
   -DINTERNAL_BOOST:BOOL=OFF
   -DBOOST_ROOT=/opt/boost
   -DINTERNAL_FFTW:BOOL=OFF
   -DINTERNAL_HDF5:BOOL=OFF
   -DUSE_NATIVE_ARCH:BOOL=ON
   -DINSTALL_PYTHON_LOCAL=OFF
   -DCFITSIO_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/cfitsio_cfitsio-3.47.tar.gz
   -DHEALPIX_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/healpix_healpix_cxx-3.50.0.tar.gz
   -DBACKTRACE_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/backtrace_d0f5e95a87a4d3e0a1ed6c069b5dae7cbab3ed2a.tar.gz
   -DEIGEN_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/eigen_eigen-3.3.7.tar.bz2
   -DPYBIND11_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/pybind11_v2.6.2.tar.gz
   -DR3D_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/r3d_b3eef85ae5dc111d0148491772e0820406cfe0ea.zip
   -DGSL_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/gsl_gsl-2.3.tar.gz
   -DCLASS_CODE_URL:URL=file:///work/aquila/workspace/ares_multi_pipeline_main/downloads/CLASS_CODE_URL_v2.9.4.tar.gz
   -DARES_PREFIX_PATH=/work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189:/opt/boost
   -DCMAKE_BUILD_TYPE=Release
   -DCMAKE_C_COMPILER=/usr/bin/cc
   -DCMAKE_CXX_COMPILER=/usr/bin/c++
-- Found: /usr/bin/cc
-- Found: /usr/bin/c++
-- Found: cmake
-- Found: autoconf
-- Found: patch
-- Found: pkg-config
-- The CXX compiler identification is GNU 10.2.1
-- The C compiler identification is GNU 10.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") 
-- Performing Test COMPILER_SUPPORTS_MARCH_NATIVE
-- Performing Test COMPILER_SUPPORTS_MARCH_NATIVE - Success
-- Compiler ID is: C -> GNU, CXX -> GNU
-- Found Boost: /opt/boost/lib/cmake/Boost-1.76.0/BoostConfig.cmake (found suitable version "1.76.0", minimum required is "1.69") found components: random chrono regex system program_options timer stacktrace_basic stacktrace_backtrace stacktrace_addr2line 
-- Boost version 1.76.0
-- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.6") found components: CXX 
-- Found FFTW threads: /usr/lib/x86_64-linux-gnu/libfftw3_threads.so
-- Found FFTW threads: /usr/lib/x86_64-linux-gnu/libfftw3_omp.so
-- Found FFTW: /usr/lib/x86_64-linux-gnu/libfftw3.so
-- Used FFTW libraries: /usr/lib/x86_64-linux-gnu/libfftw3_omp.so;/usr/lib/x86_64-linux-gnu/libfftw3.so
-- pybind11 v2.6.2 
-- Found PythonInterp: /work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189/bin/python3 (found version "3.9.2") 
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.9.so
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- C compiler version: 10.2.1
-- C++ compiler Version: 10.2.1
-- ARES modules found:
--   ares_fg
--   ares_fg@tmp
--   borg
--   borg@tmp
--   demo (do not build)
--   hades
--   hades@tmp
--   hmclet
--   hmclet@tmp
--   python
--   python@tmp
-- Registering forward model libLSS/physics/forwards/transfer.hpp
-- Registering forward model libLSS/physics/forwards/borg_lpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_lpt_neutrino.hpp
-- Registering forward model libLSS/physics/forwards/borg_qlpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_qlpt_rsd.hpp
-- Registering forward model libLSS/physics/forwards/borg_2lpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_multi_pm.hpp
-- Registering forward model libLSS/physics/forwards/downgrade.hpp
-- Registering forward model libLSS/physics/forwards/softplus.hpp
-- Registering forward model libLSS/physics/forwards/enforceMass.hpp
-- Registering forward model libLSS/physics/forwards/patch_model.hpp
-- Registering forward model libLSS/physics/forwards/adapt_generic_bias.hpp
-- Registering forward model libLSS/physics/forwards/altair_ap.hpp
-- Registering forward model libLSS/physics/forwards/sphere_projection.hpp
-- Registering likelihood libLSS/samplers/lensing/hades_lensing_likelihood.hpp
-- Registering likelihood libLSS/samplers/reduced_shear/hades_reduced_shear_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_poisson_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_null_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_oct_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_oct_likelihood_marg.hpp
-- Registering likelihood libLSS/samplers/borg/borg_studentT_likelihood.hpp
-- Registering likelihood libLSS/samplers/generic/generic_registry.hpp
-- Registering forward model libLSS/physics/forwards/primordial.hpp
-- Registering forward model libLSS/physics/forwards/primordial_as.hpp
-- Registering forward model libLSS/physics/forwards/transfer_ehu.hpp
-- Registering forward model libLSS/physics/forwards/transfer_class.hpp
-- Registering forward model libLSS/physics/forwards/fnl.hpp
-- Registering forward model libLSS/physics/hades_pt.hpp
-- Registering forward model libLSS/physics/haar.hpp
-- Registering forward model libLSS/physics/hades_log.hpp
-- Registering forward model libLSS/physics/forwards/upgrade.hpp
-- Registering likelihood libLSS/samplers/hades/hades_linear_likelihood.hpp
CMake Warning at cmake_modules/color_msg.cmake:31 (message):
  ARES deps are :
  cfitsio;healpix;backtrace;eigen;gsl;cosmotool;class_code
Call Stack (most recent call first):
  libLSS/CMakeLists.txt:98 (cmessage)


-- Meta deps :  test_part_swapper test_aux_attributes test_generic_likelihood_base test_generic_likelihood_s_field test_generic_likelihood_bias test_ghost_planes test_many_power test_fmin test_robust_poisson test_generic_likelihood_foreground test_power_law_1 test_power_law_0 test_patch_model test_broken_power_law test_forward_velocity test_spherical_projection test_oct_likelihood test_lensing_minimal test_symplectic test_modelio test_hermiticity test_ghost_array test_representation test_hmclet test_dense_mass test_console test_has_member test_proj test_messenger test_messenger2 test_messenger3 test_schechter test_rgen test_window3d test_slice_sweep test_slice_sweep_double test_cic test_mngp test_uninit test_fused_array test_supersampling test_gradient_supersampling test_array test_auto_interpolator test_gig test_fuse_wrapper test_tuple test_fused_cond test_cic_adjoint test_cg test_cpu_feature test_r3d test_hdf5_buffered test_overload test_class_interface test_domains test_mpi_types test_markov_state test_multi_chain
-- HADES found BORG
-- HADES did not find JULIA
-- Julia missing, Hades_Julia disabled
-- INCLUDE_PATH=/work/aquila/workspace/ares_multi_pipeline_main/build;/work/aquila/workspace/ares_multi_pipeline_main/build/_deps/r3d-src;/work/aquila/workspace/ares_multi_pipeline_main/extra/ares_fg;/work/aquila/workspace/ares_multi_pipeline_main/extra/borg;/work/aquila/workspace/ares_multi_pipeline_main/extra/hades;/work/aquila/workspace/ares_multi_pipeline_main/extra/hmclet
-- Docfiles=
-- System python site: /work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189/lib/python3.9/site-packages
-- User python site: /home/jenkins/.local/lib/python3.9/site-packages
-- Python install location: /work/aquila/workspace/ares_multi_pipeline_main/jenkins-ares_multi_pipeline-main-189/lib/python3.9/site-packages
-- Configuring done
-- Generating done
-- Build files have been written to: /work/aquila/workspace/ares_multi_pipeline_main/build
------------------------------------------------------------------

Configuration done.
Move to /work/aquila/workspace/ares_multi_pipeline_main/build and type 'make' now.
Please check the configuration of your MPI C compiler. You may need
to set an environment variable to use the proper compiler.

Some example (for SH/BASH shells):
- OpenMPI:
    OMPI_CC=/usr/bin/cc
    OMPI_CXX=/usr/bin/c++
    export OMPI_CC OMPI_CXX

------------------------------------------------------------------