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17: [ 0/ 1] [DEBUG ] | | | | tmp_slice ((0 - 63, 0 - 63, 0 - 63, ))
17: [ 0/ 1] [DEBUG ] | | | | output ((0 - 63, 0 - 63, 0 - 63, ))
17: [ 0/ 1] [DEBUG ] | | | | slice = (0 - 63, 0 - 63, 0 - 63) /// shifter = 0,0,0,
17: [ 0/ 1] [DEBUG ] | | | | sliced output ((0 - 63, 0 - 63, 0 - 63, ))
17: [ 0/ 1] [DEBUG ] | | | | Using optimized 3-loop collapsed omp, 0x0x0 -- 63x63x63
17: [ 0/ 1] [DEBUG ] | | | Done
17: [ 0/ 1] [DEBUG ] | | | Now process
17: [ 0/ 1] [DEBUG ] | | | Freeing 1.90771 MB
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/tools/domains.cpp]void LibLSS::mpiDomainRun(LibLSS::MPI_Communication*, LibLSS::Domain<T, N>&, LibLSS::Domain<T, N>&, const LibLSS::DomainTodo<N>&) [with T = double; long unsigned int N = 3; LibLSS::Domain<T, N> = boost::multi_array_ref<double, 3>]
17: [ 0/ 1] [DEBUG ] | | | Now process
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | | Freeing 2 MB
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]std::unique_ptr<LibLSS::DataRepresentation::AbstractRepresentation> LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::shallowMove() [with T = double; long unsigned int Nd = 3]
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 3]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 3]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]std::unique_ptr<LibLSS::DataRepresentation::AbstractRepresentation> LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::shallowMove() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/forwards/kappa_sphere.cpp]virtual LibLSS::GeneralIO::details::Output LibLSS::ForwardKappaSphere::getResultForward_v3(LibLSS::GeneralIO::details::Output)
17: [ 0/ 1] [DEBUG ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/converters.cpp]LibLSS::DataRepresentation::AbstractRepresentation_p check_tiled_io(LibLSS::DataRepresentation::AbstractRepresentation_p&&, LibLSS::DataRepresentation::Descriptor&) [with T = double; long unsigned int Nd = 1; LibLSS::DataRepresentation::AbstractRepresentation_p = std::unique_ptr<LibLSS::DataRepresentation::AbstractRepresentation>]
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] | Freeing 1.5 MB
17: [ 0/ 1] [DEBUG ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/tiled_array.cpp]void LibLSS::TiledArray<T, Nd>::setLocalTile(LibLSS::TiledArray<T, Nd>::IndexType, LibLSS::TiledArray<T, Nd>::DimType, LibLSS::TiledArray<T, Nd>::PaddingType) [with T = double; long unsigned int Nd = 1; LibLSS::TiledArray<T, Nd>::IndexType = std::array<long int, 1>; LibLSS::TiledArray<T, Nd>::DimType = std::array<long unsigned int, 1>; LibLSS::TiledArray<T, Nd>::PaddingType = std::array<short unsigned int, 2>]
17: [ 0/ 1] [DEBUG ] | | Processing block and recursively split it into chunks that cover the acceptable domain
17: [ 0/ 1] [DEBUG ] | | -- Total block is 0,0, /// 0,
17: [ 0/ 1] [DEBUG ] | | -- Accept block 0,0, /// 0,
17: [ 0/ 1] [DEBUG ] | | Block is empty! Skip.
17: [ 0/ 1] [DEBUG ] | | Processing block and recursively split it into chunks that cover the acceptable domain
17: [ 0/ 1] [DEBUG ] | | -- Total block is 196608,196608, /// 0,
17: [ 0/ 1] [DEBUG ] | | -- Accept block 196608,196608, /// 0,
17: [ 0/ 1] [DEBUG ] | | Block is empty! Skip.
17: [ 0/ 1] [DEBUG ] | | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/tools/domains.cpp]void LibLSS::computeCompleteDomainSpec(LibLSS::MPI_Communication*, LibLSS::CompleteDomainSpec<N>&, const LibLSS::DomainSpec<N>&) [with long unsigned int N = 1]
17: [ 0/ 1] [DEBUG ] | | | domainPerNodes[0]=1, displs[0]=0
17: [ 0/ 1] [DEBUG ] | | | Index is filled
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/tools/domains.cpp]void LibLSS::computeCompleteDomainSpec(LibLSS::MPI_Communication*, LibLSS::CompleteDomainSpec<N>&, const LibLSS::DomainSpec<N>&) [with long unsigned int N = 1]
17: [ 0/ 1] [DEBUG ] | | | domainPerNodes[0]=0, displs[0]=0
17: [ 0/ 1] [DEBUG ] | | | Index is empty
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | | Allocated 1.5 MB
17: [ 0/ 1] [DEBUG ] | | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/tools/domains.cpp]void LibLSS::mpiDomainComputeTodo(LibLSS::MPI_Communication*, const LibLSS::CompleteDomainSpec<N>&, const LibLSS::CompleteDomainSpec<N>&, LibLSS::DomainTodo<N>&, LibLSS::SliceOperation) [with long unsigned int N = 1]
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/tools/domains.cpp]void LibLSS::mpiDomainRun(LibLSS::MPI_Communication*, LibLSS::Domain<T, N>&, LibLSS::Domain<T, N>&, const LibLSS::DomainTodo<N>&) [with T = double; long unsigned int N = 1; LibLSS::Domain<T, N> = boost::multi_array_ref<double, 1>]
17: [ 0/ 1] [DEBUG ] | | | Now process
17: [ 0/ 1] [DEBUG ] | | Done
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::AbstractRepresentation_p LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::close() [with T = double; long unsigned int Nd = 1; LibLSS::DataRepresentation::AbstractRepresentation_p = std::unique_ptr<LibLSS::DataRepresentation::AbstractRepresentation>]
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] | Done
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]std::unique_ptr<LibLSS::DataRepresentation::AbstractRepresentation> LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::shallowMove() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Freeing 1.5 MB
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 1]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 3]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/data/tiledarray_representation.cpp]LibLSS::DataRepresentation::TiledArrayRepresentation<T, Nd>::~TiledArrayRepresentation() [with T = double; long unsigned int Nd = 3]
17: [ 0/ 1] [DEBUG ] Done
17: [ 0/ 1] [DEBUG ] Freeing 1.90771 MB
17:
17: [1;32;49m*** No errors detected
17: [0;39;49m[ 0/ 1] [DEBUG ] CLEANUP: Memory allocated database
17: [ 0/ 1] [DEBUG ] Writing memory report
17: [ 0/ 1] [DEBUG ] CLEANUP: Timing database
17/27 Test #17: BORG_test_spherical_projection ...... Passed 10.48 sec
test 18
Start 18: test_cosmo_expansion
18: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_cosmo_expansion_exe
18: Test timeout computed to be: 1500
18: Initializing console.
18: [ 0/ 1] [DEBUG ] Initialize GSL error reporter
18: [ 0/ 1] [DEBUG ] INIT: Timing database
18: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] libLSS version 5d1946ef86caa76d67ce9e3638016e4d0e608074 built-in modules
18: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/cosmo.cpp]void LibLSS::Cosmology::precompute_com2a()
18: [ 0/ 1] [DEBUG ] Done
18: 0 0 -0 1
18: 0.01 0.0100009 29.9566 1
18: 0.02 0.0200007 59.8676 1
18: 0.03 0.0300005 89.7322 1
18: 0.04 0.0400004 119.55 1
18: 0.05 0.0500002 149.32 1
18: 0.06 0.0600002 179.041 1
18: 0.07 0.0700001 208.713 1
18: 0.08 0.0800001 238.336 1
18: 0.09 0.0900002 267.908 1
18: 0.1 0.1 297.429 1
18: 0.11 0.11 326.898 1
18: 0.12 0.12 356.314 1
18: 0.13 0.13 385.678 1
18: 0.14 0.14 414.987 1
18: 0.15 0.15 444.243 1
18: 0.16 0.16 473.443 1
18: 0.17 0.17 502.587 1
18: 0.18 0.18 531.675 1
18: 0.19 0.19 560.706 1
18: 0.2 0.2 589.679 1
18: 0.21 0.21 618.594 1
18: 0.22 0.22 647.45 1
18: 0.23 0.23 676.246 1
18: 0.24 0.24 704.983 1
18: 0.25 0.25 733.659 1
18: 0.26 0.26 762.273 1
18: 0.27 0.27 790.826 1
18: 0.28 0.28 819.316 1
18: 0.29 0.29 847.743 1
18: 0.3 0.3 876.106 1
18: 0.31 0.31 904.406 1
18: 0.32 0.32 932.64 1
18: 0.33 0.33 960.81 1
18: 0.34 0.34 988.913 1
18: 0.35 0.35 1016.95 1
18: 0.36 0.36 1044.92 1
18: 0.37 0.37 1072.82 1
18: 0.38 0.38 1100.66 1
18: 0.39 0.39 1128.43 1
18: 0.4 0.4 1156.13 1
18: 0.41 0.41 1183.75 1
18: 0.42 0.42 1211.31 1
18: 0.43 0.43 1238.8 1
18: 0.44 0.44 1266.22 1
18: 0.45 0.45 1293.57 1
18: 0.46 0.46 1320.85 1
18: 0.47 0.47 1348.05 1
18: 0.48 0.48 1375.18 1
18: 0.49 0.49 1402.24 1
18: 0.5 0.5 1429.23 1
18: 0.51 0.51 1456.14 1
18: 0.52 0.52 1482.98 1
18: 0.53 0.53 1509.74 1
18: 0.54 0.54 1536.43 1
18: 0.55 0.55 1563.05 1
18: 0.56 0.56 1589.59 1
18: 0.57 0.57 1616.05 1
18: 0.58 0.58 1642.44 1
18: 0.59 0.59 1668.75 1
18: 0.6 0.6 1694.99 1
18: 0.61 0.61 1721.14 1
18: 0.62 0.62 1747.23 1
18: 0.63 0.63 1773.23 1
18: 0.64 0.64 1799.16 1
18: 0.65 0.65 1825.01 1
18: 0.66 0.66 1850.78 1
18: 0.67 0.67 1876.47 1
18: 0.68 0.68 1902.08 1
18: 0.69 0.69 1927.62 1
18: 0.7 0.7 1953.07 1
18: 0.71 0.71 1978.45 1
18: 0.72 0.72 2003.75 1
18: 0.73 0.73 2028.96 1
18: 0.74 0.74 2054.1 1
18: 0.75 0.75 2079.16 1
18: 0.76 0.76 2104.14 1
18: 0.77 0.77 2129.04 1
18: 0.78 0.78 2153.85 1
18: 0.79 0.79 2178.59 1
18: 0.8 0.8 2203.25 1
18: 0.81 0.81 2227.82 1
18: 0.82 0.82 2252.32 1
18: 0.83 0.83 2276.73 1
18: 0.84 0.84 2301.06 1
18: 0.85 0.85 2325.32 1
18: 0.86 0.86 2349.49 1
18: 0.87 0.87 2373.58 1
18: 0.88 0.88 2397.59 1
18: 0.89 0.89 2421.51 1
18: 0.9 0.9 2445.36 1
18: 0.91 0.91 2469.13 1
18: 0.92 0.92 2492.81 1
18: 0.93 0.93 2516.41 1
18: 0.94 0.94 2539.93 1
18: 0.95 0.95 2563.37 1
18: 0.96 0.96 2586.73 1
18: 0.97 0.97 2610.01 1
18: 0.98 0.98 2633.21 1
18: 0.99 0.99 2656.32 1
18: 1 1 2679.35 1
18: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/physics/cosmo.cpp]void LibLSS::Cosmology::precompute_d_plus()
18: [ 0/ 1] [DEBUG ] Done
18: 0.8794390.879439
18: 0 1 1 1
18: 0.01 0.997265 0.997265 1
18: 0.02 0.994523 0.994523 1
18: 0.03 0.991773 0.991773 1
18: 0.04 0.989015 0.989016 1
18: 0.05 0.986251 0.986251 1
18: 0.06 0.983481 0.983481 1
18: 0.07 0.980704 0.980704 1
18: 0.08 0.977921 0.977921 1
18: 0.09 0.975132 0.975132 1
18: 0.1 0.972339 0.972339 1
18: 0.11 0.96954 0.96954 1
18: 0.12 0.966736 0.966736 1
18: 0.13 0.963929 0.963929 1
18: 0.14 0.961117 0.961117 1
18: 0.15 0.958301 0.958301 1
18: 0.16 0.955482 0.955482 1
18: 0.17 0.95266 0.95266 1
18: 0.18 0.949835 0.949835 1
18: 0.19 0.947007 0.947007 1
18: 0.2 0.944177 0.944177 1
18: 0.21 0.941345 0.941345 1
18: 0.22 0.938511 0.938511 1
18: 0.23 0.935675 0.935675 1
18: 0.24 0.932839 0.932839 1
18: 0.25 0.930001 0.930001 1
18: 0.26 0.927163 0.927163 1
18: 0.27 0.924324 0.924324 1
18: 0.28 0.921485 0.921485 1
18: 0.29 0.918646 0.918646 1
18: 0.3 0.915807 0.915807 1
18: 0.31 0.912969 0.912969 1
18: 0.32 0.910132 0.910132 1
18: 0.33 0.907295 0.907295 1
18: 0.34 0.90446 0.90446 1
18: 0.35 0.901627 0.901627 1
18: 0.36 0.898795 0.898795 1
18: 0.37 0.895965 0.895965 1
18: 0.38 0.893137 0.893137 1
18: 0.39 0.890311 0.890312 1
18: 0.4 0.887489 0.887489 1
18: 0.41 0.884668 0.884669 1
18: 0.42 0.881851 0.881851 1
18: 0.43 0.879037 0.879038 1
18: 0.44 0.876227 0.876227 1
18: 0.45 0.87342 0.87342 1
18: 0.46 0.870617 0.870617 1
18: 0.47 0.867817 0.867817 1
18: 0.48 0.865022 0.865022 1
18: 0.49 0.862231 0.862231 1
18: 0.5 0.859445 0.859445 1
18: 0.51 0.856663 0.856663 1
18: 0.52 0.853887 0.853887 1
18: 0.53 0.851115 0.851115 1
18: 0.54 0.848348 0.848348 1
18: 0.55 0.845586 0.845587 1
18: 0.56 0.842831 0.842831 1
18: 0.57 0.84008 0.84008 1
18: 0.58 0.837336 0.837336 1
18: 0.59 0.834597 0.834597 1
18: 0.6 0.831864 0.831865 1
18: 0.61 0.829138 0.829138 1
18: 0.62 0.826418 0.826418 1
18: 0.63 0.823704 0.823704 1
18: 0.64 0.820997 0.820997 1
18: 0.65 0.818297 0.818297 1
18: 0.66 0.815603 0.815603 1
18: 0.67 0.812917 0.812917 1
18: 0.68 0.810237 0.810237 1
18: 0.69 0.807565 0.807565 1
18: 0.7 0.8049 0.8049 1
18: 0.71 0.802242 0.802242 1
18: 0.72 0.799592 0.799592 1
18: 0.73 0.79695 0.79695 1
18: 0.74 0.794315 0.794315 1
18: 0.75 0.791688 0.791688 1
18: 0.76 0.789068 0.789068 1
18: 0.77 0.786457 0.786457 1
18: 0.78 0.783854 0.783854 1
18: 0.79 0.781259 0.781259 1
18: 0.8 0.778672 0.778672 1
18: 0.81 0.776093 0.776093 1
18: 0.82 0.773523 0.773523 1
18: 0.83 0.770961 0.770961 1
18: 0.84 0.768408 0.768408 1
18: 0.85 0.765863 0.765863 1
18: 0.86 0.763327 0.763327 1
18: 0.87 0.7608 0.7608 1
18: 0.88 0.758281 0.758281 1
18: 0.89 0.755772 0.755772 1
18: 0.9 0.753271 0.753271 1
18: 0.91 0.750779 0.750779 1
18: 0.92 0.748296 0.748296 1
18: 0.93 0.745822 0.745822 1
18: 0.94 0.743357 0.743357 1
18: 0.95 0.740901 0.740901 1
18: 0.96 0.738454 0.738454 1
18: 0.97 0.736017 0.736017 1
18: 0.98 0.733588 0.733588 1
18: 0.99 0.731169 0.731169 1
18: 1 0.72876 0.72876 1
18: [ 0/ 1] [DEBUG ] CLEANUP: Timing database
18/27 Test #18: test_cosmo_expansion ................ Passed 0.97 sec
test 19
Start 19: test_auto_interpolator_exe.output
19: Test command: /usr/bin/cmake "-D" "test_cmd=/build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_auto_interpolator_exe" "-D" "test_args:string=" "-D" "output_blessed=/build/jenkins/workspace/borg_release_3.0_2/libLSS/tests/test_auto_interpolator.cpp.expected" "-D" "output_test=/build/jenkins/workspace/borg_release_3.0_2/build/_test_dir/test_auto_interpolator_exe.out" "-P" "/build/jenkins/workspace/borg_release_3.0_2/cmake_modules/run_test.cmake"
19: Test timeout computed to be: 1500
19: ARGUMENTS: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_auto_interpolator_exe
19/27 Test #19: test_auto_interpolator_exe.output ... Passed 0.04 sec
test 20
Start 20: test_overload
20: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_overload
20: Test timeout computed to be: 1500
20: Running 2 test cases...
20:
20: [1;32;49m*** No errors detected
20: [0;39;49m
20/27 Test #20: test_overload ....................... Passed 0.01 sec
test 21
Start 21: test_mpi_types
21: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_mpi_types
21: Test timeout computed to be: 1500
21: Running 1 test case...
21:
21: [1;32;49m*** No errors detected
21: [0;39;49m[ 0/ 1] [DEBUG ] CLEANUP: Timing database
21/27 Test #21: test_mpi_types ...................... Passed 0.01 sec
test 22
Start 22: test_fuse_wrapper
22: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_fuse_wrapper
22: Test timeout computed to be: 1500
22: Running 4 test cases...
22: 10 composite multiply, sum and reduce: 0.000204s wall, 0.000000s user + 0.000000s system = 0.000000s CPU (n/a%)
22: 234057
22: Composite multiply, cos, square and reduce: 0.000175s wall, 0.000000s user + 0.000000s system = 0.000000s CPU (n/a%)
22:
22: Composite multiply, cos, abs and reduce: 0.000133s wall, 0.000000s user + 0.000000s system = 0.000000s CPU (n/a%)
22:
22: Composite multiply, cos and assign: 0.000215s wall, 0.000000s user + 0.000000s system = 0.000000s CPU (n/a%)
22:
22: 16384
22: Composite square and reduce: 0.000029s wall, 0.000000s user + 0.000000s system = 0.000000s CPU (n/a%)
22:
22:
22: [1;32;49m*** No errors detected
22: [0;39;49m
22/27 Test #22: test_fuse_wrapper ................... Passed 0.03 sec
test 23
Start 23: test_supersampling
23: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_supersampling
23: Test timeout computed to be: 1500
23: Initializing console.
23: [ 0/ 1] [DEBUG ] INIT: Memory allocated database
23: [ 0/ 1] [DEBUG ] INIT: Timing database
23: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] libLSS version 5d1946ef86caa76d67ce9e3638016e4d0e608074 built-in modules
23: [ 0/ 1] [DEBUG ] INIT: FFTW/WISDOM
23: [ 0/ 1] [DEBUG ] Entering Initializing peer system
23: [ 0/ 1] [DEBUG ] | Comm size is 1
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering Initializing peer system
23: [ 0/ 1] [DEBUG ] | Comm size is 1
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.265625 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Allocated 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::create_r2c_plan
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::create_c2r_plan
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::create_r2c_plan
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::create_c2r_plan
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 0
23: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Initializing 4 threaded random number generators
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 4293858116
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 699692587
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 1213834231
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 4068197670
23: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] MPI: Changing random number generation seed with 2012145
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 2012145
23: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] THREADED: Changing random number generation seed with 3928307629
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 3928307629
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 1906104407
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 1497171624
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 1662689450
23: [ 0/ 1] [DEBUG ] GSL: Changing random number generation seed with 3478993655
23: [ 0/ 1] [DEBUG ] ff = -7.59799e-06
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 16x16x16
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::execute_r2c
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering Upgrading modes
23: [ 0/ 1] [DEBUG ] | Going from (16,16,16) to (32,32,32)
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering Degrading modes
23: [ 0/ 1] [DEBUG ] | Going from (32,32,32) to (16,16,16)
23: [ 0/ 1] [DEBUG ] | Copying line 0 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 31 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 30 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 29 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 28 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 27 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 26 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 25 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 24 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 0 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 1 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 2 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 3 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 4 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 5 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 6 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 7 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 8 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 8 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 7 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 6 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 5 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 4 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 3 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 2 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 1 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 24 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 25 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 26 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 27 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 28 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 29 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 30 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 31 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x17
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::execute_c2r
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x32
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x32
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x32
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x32
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::execute_r2c
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 32x32x17
23: [ 0/ 1] [DEBUG ] Entering Degrading modes
23: [ 0/ 1] [DEBUG ] | Going from (32,32,32) to (16,16,16)
23: [ 0/ 1] [DEBUG ] | Copying line 0 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 31 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 30 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 29 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 28 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 27 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 26 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 25 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 24 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 0 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 1 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 2 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 3 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 4 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 5 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 6 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 7 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 8 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 8 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 7 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 6 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 5 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 4 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 3 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 2 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 1 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 24 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 25 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 26 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 27 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 28 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 29 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 30 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] | Copying line 31 (sz=32 -> 32)
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Entering Upgrading modes
23: [ 0/ 1] [DEBUG ] | Going from (16,16,16) to (32,32,32)
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [DEBUG ] Using optimized 3-loop collapsed omp, 0x0x0 -- 16x16x9
23: [ 0/ 1] [DEBUG ] Entering FFTW_Manager::execute_c2r
23: [ 0/ 1] [DEBUG ] Done
23: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Cleaning up parallel random number generators
23: [ 0/ 1] [DEBUG ] Freeing 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.265625 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.265625 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.03125 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.25 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.25 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.03125 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.03125 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.25 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.25 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.03125 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.03125 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.0351562 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.265625 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.265625 MB
23: [ 0/ 1] [DEBUG ] Freeing 0.0351562 MB
23: [ 0/ 1] [DEBUG ] CLEANUP: FFTW/WISDOM
23: [ 0/ 1] [DEBUG ] CLEANUP: Memory allocated database
23: [ 0/ 1] [DEBUG ] Writing memory report
23: [ 0/ 1] [DEBUG ] CLEANUP: Timing database
23/27 Test #23: test_supersampling .................. Passed 0.04 sec
test 24
Start 24: test_gradient_supersampling
24: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_gradient_supersampling
24: Test timeout computed to be: 1500
24: Initializing console.
24: [ 0/ 1] [DEBUG ] INIT: SIGCATCHER
24: [ 0/ 1] [DEBUG ] INIT: Memory allocated database
24: [ 0/ 1] [DEBUG ] INIT: Timing database
24: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] libLSS version 5d1946ef86caa76d67ce9e3638016e4d0e608074 built-in modules
24: [ 0/ 1] [DEBUG ] INIT: FFTW/WISDOM
24: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Initializing 4 threaded random number generators
24: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] MPI: Changing random number generation seed with 97249
24: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] THREADED: Changing random number generation seed with 2460225869
24: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Cleaning up parallel random number generators
24/27 Test #24: test_gradient_supersampling ......... Passed 0.05 sec
test 25
Start 25: test_markov_state
25: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_markov_state
25: Test timeout computed to be: 1500
25: Running 1 test case...
25:
25: [1;32;49m*** No errors detected
25: [0;39;49m
25/27 Test #25: test_markov_state ................... Passed 0.01 sec
test 26
Start 26: test_multi_chain
26: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_multi_chain
26: Test timeout computed to be: 1500
26: Running 3 test cases...
26: [ 0/ 1] [DEBUG ] Allocated 7.62939e-05 MB
26: [ 0/ 1] [DEBUG ] Creating array which is UNALIGNED
26: [ 0/ 1] [DEBUG ] Allocated 7.62939e-05 MB
26: [ 0/ 1] [DEBUG ] Creating array which is UNALIGNED
26: [ 0/ 1] [DEBUG ] Entering saveState
26: [ 0/ 1] [DEBUG ] | Saving array
26: [ 0/ 1] [DEBUG ] | Entering saveTo(): saving variable array
26: [ 0/ 1] [DEBUG ] | | partialSave or rank==0
26: [ 0/ 1] [DEBUG ] | Done
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering saveState
26: [ 0/ 1] [DEBUG ] | Saving array
26: [ 0/ 1] [DEBUG ] | Saving array2
26: [ 0/ 1] [DEBUG ] | Entering saveTo(): saving variable array2
26: [ 0/ 1] [DEBUG ] | | partialSave or rank==0
26: [ 0/ 1] [DEBUG ] | Done
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying array
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying array
26: [ 0/ 1] [DEBUG ] Freeing 7.62939e-05 MB
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying array2
26: [ 0/ 1] [DEBUG ] Freeing 7.62939e-05 MB
26: [ 0/ 1] [DEBUG ] Allocated 7.62939e-05 MB
26: [ 0/ 1] [DEBUG ] Creating array which is UNALIGNED
26: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Entering restoration of MCMC state
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Done
26: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] | Initialize variables
26: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] | Load markov state from file
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | Restoring array
26: [ 0/ 1] [DEBUG ] | Entering loadFrom full
26: [ 0/ 1] [DEBUG ] | | loadFrom(reassembly=0,partialLoad=0,autoresize=0): loading variable array
26: [ 0/ 1] [DEBUG ] | | partialSave or rank==0
26: [ 0/ 1] [DEBUG ] | Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | Restoring array
26: [ 0/ 1] [DEBUG ] | Entering loadFrom full
26: [ 0/ 1] [DEBUG ] | | loadFrom(reassembly=0,partialLoad=0,autoresize=0): loading variable array
26: [ 0/ 1] [DEBUG ] | | partialSave or rank==0
26: [ 0/ 1] [DEBUG ] | Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | Restoring array
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | Restoring array
26: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[0] = 0 (name="")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Done
26: [---/---] [STD ] Entering Initializing samplers
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[0] = 0 (name="")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Done
26: [---/---] [STD ] Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying array
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying array
26: [ 0/ 1] [DEBUG ] Freeing 7.62939e-05 MB
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[0] = 1 (name="0")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[1] = 2 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[2] = 0 (name="2")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Done
26: [---/---] [STD ] Entering Initializing samplers
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[0] = 1 (name="0")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[1] = 2 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[2] = 0 (name="2")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Done
26: [---/---] [STD ] Done
26: [---/---] [STD ] Entering MainLoop::run
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=0
26: [---/---] [STD ] | Main loop iteration 33 % (ETA 00:00:00, elapsed 00:00:00)
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=1
26: [---/---] [STD ] | Main loop iteration 66 % (ETA 00:00:00, elapsed 00:00:00)
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=2
26: [---/---] [STD ] | Main loop iteration 100 % (ETA 00:00:00, elapsed 00:00:00)
26: [---/---] [STD ] Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying dummy
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying dummy_group
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [ 0/ 1] [DEBUG ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]LibLSS::BlockSampler& LibLSS::BlockSampler::operator<<(std::shared_ptr<LibLSS::MarkovSampler>&&)
26: [ 0/ 1] [DEBUG ] Done
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[0] = 2 (name="0")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[1] = 0 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[2] = 3 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | run_order[3] = 1 (name="2")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] Done
26: [---/---] [STD ] Entering Initializing samplers
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Entering [/build/jenkins/workspace/borg_release_3.0_2/libLSS/samplers/core/main_loop.cpp]void LibLSS::MainLoop::finalizeGraph()
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | Sampler ordering:
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[0] = 2 (name="0")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[1] = 0 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[2] = 3 (name="1")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | | run_order[3] = 1 (name="2")
26: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | Done
26: [---/---] [STD ] Done
26: [---/---] [STD ] Entering MainLoop::run
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=0
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=2
26: [---/---] [STD ] | Main loop iteration 50 % (ETA 00:00:00, elapsed 00:00:00)
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=1
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] | running id=3
26: [---/---] [STD ] | Main loop iteration 100 % (ETA 00:00:00, elapsed 00:00:00)
26: [---/---] [STD ] Done
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying dummy
26: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Destroying dummy_group
26:
26: [1;32;49m*** No errors detected
26: [0;39;49m[ 0/ 1] [DEBUG ] CLEANUP: Memory allocated database
26: [ 0/ 1] [DEBUG ] Writing memory report
26: [ 0/ 1] [DEBUG ] CLEANUP: Timing database
26/27 Test #26: test_multi_chain .................... Passed 0.13 sec
test 27
Start 27: cg
27: Test command: /build/jenkins/workspace/borg_release_3.0_2/build/libLSS/tests/test_cg
27: Test timeout computed to be: 1500
27: Initializing console.
27: [ 0/ 1] [DEBUG ] INIT: Memory allocated database
27: [ 0/ 1] [DEBUG ] INIT: Timing database
27: [ 0/ 1] [[40;0m[33;1mINFO[39;0m[49;0m ] libLSS version 5d1946ef86caa76d67ce9e3638016e4d0e608074 built-in modules
27: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Entering CG::run
27: [ 0/ 1] [DEBUG ] | Allocated 0.0152588 MB
27: [ 0/ 1] [DEBUG ] | Allocated 0.0152588 MB
27: [ 0/ 1] [DEBUG ] | Allocated 0.0152588 MB
27: [ 0/ 1] [DEBUG ] | residue is dq=5.23918e+09
27: [ 0/ 1] [DEBUG ] | alpha = 0.798153
27: [ 0/ 1] [DEBUG ] | Refresh!
27: [ 0/ 1] [DEBUG ] | t=0 residue is dnew=179118 / dinit=4.18167e+09 => ratio=4.2834e-05
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.999957
27: [ 0/ 1] [DEBUG ] | residue is dnew=179118 / dcheck=179118 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=156026
27: [ 0/ 1] [DEBUG ] | alpha = 1.148
27: [ 0/ 1] [DEBUG ] | t=1 residue is dnew=13249.4 / dinit=4.18167e+09 => ratio=3.16844e-06
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.92603
27: [ 0/ 1] [DEBUG ] | residue is dnew=13249.4 / dcheck=13249.4 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=8828.76
27: [ 0/ 1] [DEBUG ] | alpha = 1.50071
27: [ 0/ 1] [DEBUG ] | t=2 residue is dnew=2259.03 / dinit=4.18167e+09 => ratio=5.40222e-07
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.829499
27: [ 0/ 1] [DEBUG ] | residue is dnew=2259.03 / dcheck=2259.03 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=1291.23
27: [ 0/ 1] [DEBUG ] | alpha = 1.74951
27: [ 0/ 1] [DEBUG ] | t=3 residue is dnew=581.591 / dinit=4.18167e+09 => ratio=1.39081e-07
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.742548
27: [ 0/ 1] [DEBUG ] | residue is dnew=581.591 / dcheck=581.591 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=301.062
27: [ 0/ 1] [DEBUG ] | alpha = 1.9318
27: [ 0/ 1] [DEBUG ] | t=4 residue is dnew=191.883 / dinit=4.18167e+09 => ratio=4.58868e-08
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.670072
27: [ 0/ 1] [DEBUG ] | residue is dnew=191.883 / dcheck=191.883 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=92.7199
27: [ 0/ 1] [DEBUG ] | alpha = 2.06949
27: [ 0/ 1] [DEBUG ] | t=5 residue is dnew=74.6725 / dinit=4.18167e+09 => ratio=1.78571e-08
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.610844
27: [ 0/ 1] [DEBUG ] | residue is dnew=74.6725 / dcheck=74.6725 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=34.32
27: [ 0/ 1] [DEBUG ] | alpha = 2.17577
27: [ 0/ 1] [DEBUG ] | t=6 residue is dnew=32.6546 / dinit=4.18167e+09 => ratio=7.80899e-09
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.562696
27: [ 0/ 1] [DEBUG ] | residue is dnew=32.6546 / dcheck=32.6546 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=14.4558
27: [ 0/ 1] [DEBUG ] | alpha = 2.25892
27: [ 0/ 1] [DEBUG ] | t=7 residue is dnew=15.5547 / dinit=4.18167e+09 => ratio=3.71974e-09
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.52366
27: [ 0/ 1] [DEBUG ] | residue is dnew=15.5547 / dcheck=15.5547 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=6.69186
27: [ 0/ 1] [DEBUG ] | alpha = 2.32442
27: [ 0/ 1] [DEBUG ] | t=8 residue is dnew=7.89964 / dinit=4.18167e+09 => ratio=1.88911e-09
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.492138
27: [ 0/ 1] [DEBUG ] | residue is dnew=7.89964 / dcheck=7.89964 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=3.32466
27: [ 0/ 1] [DEBUG ] | alpha = 2.37608
27: [ 0/ 1] [DEBUG ] | t=9 residue is dnew=4.21174 / dinit=4.18167e+09 => ratio=1.00719e-09
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.466844
27: [ 0/ 1] [DEBUG ] | residue is dnew=4.21174 / dcheck=4.21174 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=1.74278
27: [ 0/ 1] [DEBUG ] | alpha = 2.41668
27: [ 0/ 1] [DEBUG ] | t=10 residue is dnew=2.33026 / dinit=4.18167e+09 => ratio=5.57256e-10
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.446722
27: [ 0/ 1] [DEBUG ] | residue is dnew=2.33026 / dcheck=2.33026 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.951752
27: [ 0/ 1] [DEBUG ] | alpha = 2.44839
27: [ 0/ 1] [DEBUG ] | t=11 residue is dnew=1.32619 / dinit=4.18167e+09 => ratio=3.17145e-10
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.430882
27: [ 0/ 1] [DEBUG ] | residue is dnew=1.32619 / dcheck=1.32619 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.536283
27: [ 0/ 1] [DEBUG ] | alpha = 2.47294
27: [ 0/ 1] [DEBUG ] | t=12 residue is dnew=0.771105 / dinit=4.18167e+09 => ratio=1.84401e-10
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.418557
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.771105 / dcheck=0.771105 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.309465
27: [ 0/ 1] [DEBUG ] | alpha = 2.49174
27: [ 0/ 1] [DEBUG ] | t=13 residue is dnew=0.455655 / dinit=4.18167e+09 => ratio=1.08965e-10
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.409088
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.455655 / dcheck=0.455655 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.181827
27: [ 0/ 1] [DEBUG ] | alpha = 2.50599
27: [ 0/ 1] [DEBUG ] | t=14 residue is dnew=0.272526 / dinit=4.18167e+09 => ratio=6.51715e-11
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.401904
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.272526 / dcheck=0.272526 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.108289
27: [ 0/ 1] [DEBUG ] | alpha = 2.51666
27: [ 0/ 1] [DEBUG ] | t=15 residue is dnew=0.164463 / dinit=4.18167e+09 => ratio=3.93295e-11
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.396522
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.164463 / dcheck=0.164463 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.0651454
27: [ 0/ 1] [DEBUG ] | alpha = 2.52456
27: [ 0/ 1] [DEBUG ] | t=16 residue is dnew=0.0999049 / dinit=4.18167e+09 => ratio=2.38912e-11
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.392539
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.0999049 / dcheck=0.0999049 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.0394828
27: [ 0/ 1] [DEBUG ] | alpha = 2.53034
27: [ 0/ 1] [DEBUG ] | t=17 residue is dnew=0.0609796 / dinit=4.18167e+09 => ratio=1.45826e-11
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.389624
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.0609796 / dcheck=0.0609796 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.0240594
27: [ 0/ 1] [DEBUG ] | alpha = 2.53454
27: [ 0/ 1] [DEBUG ] | t=18 residue is dnew=0.0373491 / dinit=4.18167e+09 => ratio=8.93163e-12
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.387514
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.0373491 / dcheck=0.0373491 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.0147186
27: [ 0/ 1] [DEBUG ] | alpha = 2.53755
27: [ 0/ 1] [DEBUG ] | t=19 residue is dnew=0.0229323 / dinit=4.18167e+09 => ratio=5.48401e-12
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.386002
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.0229323 / dcheck=0.0229323 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.00902957
27: [ 0/ 1] [DEBUG ] | alpha = 2.53969
27: [ 0/ 1] [DEBUG ] | t=20 residue is dnew=0.014105 / dinit=4.18167e+09 => ratio=3.37306e-12
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.384927
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.014105 / dcheck=0.014105 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.00555054
27: [ 0/ 1] [DEBUG ] | alpha = 2.5412
27: [ 0/ 1] [DEBUG ] | t=21 residue is dnew=0.00868629 / dinit=4.18167e+09 => ratio=2.07723e-12
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.384171
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.00868629 / dcheck=0.00868629 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.00341676
27: [ 0/ 1] [DEBUG ] | alpha = 2.54226
27: [ 0/ 1] [DEBUG ] | t=22 residue is dnew=0.00535387 / dinit=4.18167e+09 => ratio=1.28032e-12
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.383642
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.00535387 / dcheck=0.00535387 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | residue is dq=0.00210534
27: [ 0/ 1] [DEBUG ] | alpha = 2.54299
27: [ 0/ 1] [DEBUG ] | t=23 residue is dnew=0.00330186 / dinit=4.18167e+09 => ratio=7.89605e-13
27: [ 0/ 1] [DEBUG ] | beta - 1 =-0.383275
27: [ 0/ 1] [DEBUG ] | residue is dnew=0.00330186 / dcheck=0.00330186 / dinit=4.18167e+09
27: [ 0/ 1] [DEBUG ] | breaking at 7.89605e-13
27: [ 0/ 1] [DEBUG ] | Done with CG
27: [---/---] [[40;0m[33;1mINFO S[39;0m[49;0m ] | applying conjugate gradient 100 % (ETA 00:00:00, elapsed 00:00:00)
27: [ 0/ 1] [DEBUG ] | Freeing 0.0152588 MB
27: [ 0/ 1] [DEBUG ] | Freeing 0.0152588 MB
27: [ 0/ 1] [DEBUG ] | Freeing 0.0152588 MB
27: [ 0/ 1] [[40;0m[36;1mVERBOSE[39;0m[49;0m] Done
27:
27: CG matrix inversion test passed!
27: Distance between truth and solution = 0.614352
27: Largest deviation = 0.33555 at element imax =1999
27: [ 0/ 1] [DEBUG ] CLEANUP: Memory allocated database
27: [ 0/ 1] [DEBUG ] Writing memory report
27: [ 0/ 1] [DEBUG ] CLEANUP: Timing database
27/27 Test #27: cg .................................. Passed 1.00 sec
100% tests passed, 0 tests failed out of 27
Total Test time (real) = 30.52 sec
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Install)
[Pipeline] dir
Running in /home/jenkins-agent/work/workspace/borg_release_3.0_2/build
[Pipeline] {
[Pipeline] sh
+ make install
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Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/bbn
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/bbn/sBBN_2017.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/bbn/sBBN.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/bbn/sBBN_2017_marcucci.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/output_xe.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/input.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/two_photon_tables.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/two_photon_tables_hires.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/Alpha_inf.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/R_inf.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/share/aquila_borg//class/hyrec/fit_swift.dat
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/_borg.cpython-310-x86_64-linux-gnu.so
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/borg
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/borg/__init__.py
-- Up-to-date: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/dask_support
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/dask_support/__init__.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/borg_native.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/dft.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/__init__.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/utils.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages/aquila_borg/dask.py
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/ares3
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/hades3
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/borg2gadget3
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/borg_forward
-- Installing: /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/borg_help
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Doc)
[Pipeline] dir
Running in /home/jenkins-agent/work/workspace/borg_release_3.0_2/docs
[Pipeline] {
[Pipeline] sh
Warning: A secret was passed to "sh" using Groovy String interpolation, which is insecure.
Affected argument(s) used the following variable(s): [DOC_DEPLOYER]
See https://jenkins.io/redirect/groovy-string-interpolation for details.
+ . /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
++ PATH=/home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(jenkins-borg-release2F3.0-21) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(jenkins-borg-release2F3.0-21) '
++ export VIRTUAL_ENV_PROMPT
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ pip3 install wheel
Requirement already satisfied: wheel in /build/jenkins/workspace/borg_release_3.0_2/jenkins-borg-release2F3.0-21/lib/python3.10/site-packages (0.41.1)
+ pip3 install -U -r requirements.txt
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Installing collected packages: webencodings, wcwidth, sphinxcontrib-fulltoc, snowballstemmer, pure-eval, ptyprocess, ply, pickleshare, json5, ipython-genutils, fastjsonschema, executing, disttools, backcall, wrapt, widgetsnbextension, websocket-client, webcolors, urllib3, uri-template, typing-extensions, traitlets, tornado, tinycss2, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, soupsieve, sniffio, six, setuptools, send2trash, rpds-py, rfc3986-validator, qtpy, pyzmq, pyyaml, python-json-logger, Pygments, pycparser, psutil, prompt-toolkit, prometheus-client, plumbum, platformdirs, pexpect, parso, pandocfilters, overrides, nest-asyncio, mistune, MarkupSafe, lxml, jupyterlab-widgets, jupyterlab-pygments, jsonpointer, imagesize, idna, fqdn, docutils, defusedxml, decorator, debugpy, charset-normalizer, certifi, babel, attrs, alabaster, terminado, rfc3339-validator, requests, referencing, python-dateutil, pandoc, matplotlib-inline, jupyter-core, jinja2, jedi, deprecated, comm, cffi, bleach, beautifulsoup4, async-lru, asttokens, anyio, stack-data, sphinx, jupyter-server-terminals, jupyter-client, jsonschema-specifications, arrow, argon2-cffi-bindings, sphinxcontrib-jquery, sphinx-mathjax-offline, sphinx_copybutton, jsonschema, isoduration, ipython, breathe, argon2-cffi, sphinx_rtd_theme, nbformat, ipywidgets, ipykernel, exhale, qtconsole, nbclient, jupyter-events, jupyter-console, nbconvert, nbsphinx, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab, notebook, jupyter
Attempting uninstall: setuptools
Found existing installation: setuptools 59.6.0
Uninstalling setuptools-59.6.0:
Successfully uninstalled setuptools-59.6.0
Successfully installed MarkupSafe-2.1.3 Pygments-2.16.1 alabaster-0.7.13 anyio-3.7.1 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.2.3 asttokens-2.2.1 async-lru-2.0.4 attrs-23.1.0 babel-2.12.1 backcall-0.2.0 beautifulsoup4-4.12.2 bleach-6.0.0 breathe-4.35.0 certifi-2023.7.22 cffi-1.15.1 charset-normalizer-3.2.0 comm-0.1.4 debugpy-1.6.7.post1 decorator-5.1.1 defusedxml-0.7.1 deprecated-1.2.14 disttools-0.1.6 docutils-0.17.1 executing-1.2.0 exhale-0.3.6 fastjsonschema-2.18.0 fqdn-1.5.1 idna-3.4 imagesize-1.4.1 ipykernel-6.25.1 ipython-8.14.0 ipython-genutils-0.2.0 ipywidgets-8.1.0 isoduration-20.11.0 jedi-0.19.0 jinja2-3.1.2 json5-0.9.14 jsonpointer-2.4 jsonschema-4.19.0 jsonschema-specifications-2023.7.1 jupyter-1.0.0 jupyter-client-8.3.0 jupyter-console-6.6.3 jupyter-core-5.3.1 jupyter-events-0.7.0 jupyter-lsp-2.2.0 jupyter-server-2.7.1 jupyter-server-terminals-0.4.4 jupyterlab-4.0.5 jupyterlab-pygments-0.2.2 jupyterlab-server-2.24.0 jupyterlab-widgets-3.0.8 lxml-4.9.3 matplotlib-inline-0.1.6 mistune-3.0.1 nbclient-0.8.0 nbconvert-7.7.3 nbformat-5.9.2 nbsphinx-0.9.2 nest-asyncio-1.5.7 notebook-7.0.2 notebook-shim-0.2.3 overrides-7.4.0 pandoc-2.3 pandocfilters-1.5.0 parso-0.8.3 pexpect-4.8.0 pickleshare-0.7.5 platformdirs-3.10.0 plumbum-1.8.2 ply-3.11 prometheus-client-0.17.1 prompt-toolkit-3.0.39 psutil-5.9.5 ptyprocess-0.7.0 pure-eval-0.2.2 pycparser-2.21 python-dateutil-2.8.2 python-json-logger-2.0.7 pyyaml-6.0.1 pyzmq-25.1.1 qtconsole-5.4.3 qtpy-2.3.1 referencing-0.30.2 requests-2.31.0 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.9.2 send2trash-1.8.2 setuptools-68.1.0 six-1.16.0 sniffio-1.3.0 snowballstemmer-2.2.0 soupsieve-2.4.1 sphinx-4.5.0 sphinx-mathjax-offline-0.0.2 sphinx_copybutton-0.5.2 sphinx_rtd_theme-1.2.2 sphinxcontrib-applehelp-1.0.4 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-fulltoc-1.2.0 sphinxcontrib-htmlhelp-2.0.1 sphinxcontrib-jquery-4.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.3 sphinxcontrib-serializinghtml-1.1.5 stack-data-0.6.2 terminado-0.17.1 tinycss2-1.2.1 tornado-6.3.3 traitlets-5.9.0 typing-extensions-4.7.1 uri-template-1.3.0 urllib3-2.0.4 wcwidth-0.2.6 webcolors-1.13 webencodings-0.5.1 websocket-client-1.6.1 widgetsnbextension-4.0.8 wrapt-1.15.0
+ rm -fr source/_generate
+ rm -fr _build
+ make html
Running Sphinx v4.5.0
making output directory... done
[autosummary] generating autosummary for: developer/Code_tutorials/Adding_a_new_likelihood_in_C++.rst, developer/Code_tutorials/CPP_Multiarray.rst, developer/Code_tutorials/FFTW_manager.rst, developer/Code_tutorials/Julia_and_TensorFlow.rst, developer/Code_tutorials/New_core_program.rst, developer/Code_tutorials/Types.rst, developer/Code_tutorials/reading_arrays_from_cpp.rst, developer/Code_tutorials/timing_stats.rst, developer/code_architecture.rst, developer/code_tutorials.rst, ..., user/clusters/SNIC.rst, user/extras.rst, user/extras/dm_sheet.rst, user/extras/hmclet.rst, user/inputs.rst, user/outputs.rst, user/postprocessing.rst, user/running.rst, user/user.rst, user/versions.rst
Initializing console.
[INFO ] libLSS version 5d1946ef86caa76d67ce9e3638016e4d0e608074 built-in modules
[INFO S ] Registered forward models:
[INFO S ] 2LPT_CIC, 2LPT_CIC_OPENMP, 2LPT_DOUBLE, 2LPT_NGP, ALTAIR_AP, Downgrade
[INFO S ] EnforceMass, HADES_LOG, HADES_PT, Haar, LPT_CIC, LPT_CIC_OPENMP, LPT_DOUBLE
[INFO S ] LPT_NGP, LPT_NU_CIC, LPT_NU_CIC_OPENMP, PATCH_MODEL, PM_CIC, PM_CIC_OPENMP
[INFO S ] PM_CIC_OPENMP2, PRIMORDIAL, PRIMORDIAL_AS, PRIMORDIAL_FNL, QLPT, QLPT_RSD
[INFO S ] Softplus, TRANSFER_CLASS, TRANSFER_EHU, Transfer, Upgrade, bias::BrokenPowerLaw
[INFO S ] bias::BrokenPowerLawSigmoid, bias::DoubleBrokenPowerLaw, bias::EFT, bias::EFT_Thresh
[INFO S ] bias::Linear, bias::ManyPower_1^1, bias::ManyPower_1^2, bias::ManyPower_1^4
[INFO S ] bias::ManyPower_2^2, bias::Noop, bias::PowerLaw
[INFO S ] Registered forward models (v3):
[INFO S ] KappaSphere
[INFO S ] Registered likelihoods:
[INFO S ] BORG_NULL, BORG_POISSON, BORG_REDUCED_SHEAR, BORG_SHEAR, BORG_STUDENT_T
[INFO S ] EFT_BIAS_LIKE, EFT_BIAS_MARG_LIKE, GAUSSIAN_BROKEN_POWER_LAW_BIAS, GAUSSIAN_LINEAR_BIAS
[INFO S ] GAUSSIAN_MO_WHITE_BIAS, GAUSSIAN_POWER_LAW_BIAS, GENERIC_GAUSSIAN_MANY_POWER_1^1
[INFO S ] GENERIC_GAUSSIAN_MANY_POWER_1^2, GENERIC_POISSON_BROKEN_POWERLAW_BIAS
[INFO S ] GENERIC_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS, GENERIC_POISSON_MANY_POWER_1^1
[INFO S ] GENERIC_POISSON_MANY_POWER_1^2, GENERIC_POISSON_MANY_POWER_1^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MANY_POWER_2^2, GENERIC_POISSON_MANY_POWER_2^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MO_WHITE_BIAS, GENERIC_POISSON_POWERLAW_BIAS, GENERIC_POISSON_POWERLAW_BIAS_DEGRADE4
[INFO S ] HADES_LINEAR, NOOP_POISSON, OCT_LIKELIHOOD, OCT_LIKELIHOOD_MARG, POISSON
[INFO S ] ROBUST_POISSON_BROKEN_POWERLAW_BIAS, ROBUST_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS
[INFO S ] ROBUST_POISSON_MANY_POWER_1^1, ROBUST_POISSON_MANY_POWER_1^2, ROBUST_POISSON_POWERLAW_BIAS
[INFO ] Registering data IO converters
[INFO S ] ARES3 base version 5d1946ef86caa76d67ce9e3638016e4d0e608074
[INFO S ] GIT report
[INFO S ] - Module: root, Version: 5d1946ef86caa76d67ce9e3638016e4d0e608074
[INFO S ] [0m
[INFO S ]
[INFO ] CPU features: MMX AVX AVX2 AVX512F SSE SSE2 SSE3 SSE4.1 SSE4.2 AES BMI BMI2
[autosummary] generating autosummary for: /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BORGForwardModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BaseForwardModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BoxModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BoxModel1.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BoxModel2.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.BoxModel3.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.ChainForwardModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.ForwardModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.ParticleBasedForwardModel.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg._borg.forward.PreferredIO.rst, ..., /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.AOHMCDensitySampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.AltairMetaSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.BiasModelParamsSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.GenericBiasSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.HMCDensitySampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.MarkovSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.ModelParamsSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.PyBaseSampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.Sigma8Sampler.rst, /build/jenkins/workspace/borg_release_3.0_2/docs/source/_generate/aquila_borg.samplers.slice_sampler.rst
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 40 source files that are out of date
updating environment: [new config] 114 added, 0 changed, 0 removed
reading sources... [ 0%] _generate/aquila_borg._borg.forward.BORGForwardModel
reading sources... [ 1%] _generate/aquila_borg._borg.forward.BaseForwardModel
reading sources... [ 2%] _generate/aquila_borg._borg.forward.BoxModel
reading sources... [ 3%] _generate/aquila_borg._borg.forward.BoxModel1
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reading sources... [ 5%] _generate/aquila_borg._borg.forward.BoxModel3
reading sources... [ 6%] _generate/aquila_borg._borg.forward.ChainForwardModel
reading sources... [ 7%] _generate/aquila_borg._borg.forward.ForwardModel
reading sources... [ 7%] _generate/aquila_borg._borg.forward.ParticleBasedForwardModel
reading sources... [ 8%] _generate/aquila_borg._borg.forward.PreferredIO
reading sources... [ 9%] _generate/aquila_borg.cosmo.ClassCosmo
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WARNING: dot command 'dot' cannot be run (needed for graphviz output), check the graphviz_dot setting
/build/jenkins/workspace/borg_release_3.0_2/docs/source/python_developer/python.rst:573: WARNING: undefined label: ginput
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build succeeded, 12 warnings.
The HTML pages are in _build/html.
+ tar -C _build/html -zcvf doc.tgz .
./
./search.html
./theory/
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./user/
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./_images/
./_images/Residual_correlation_length.png
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./_images/ares_basic_outputs_23_1.png
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./objects.inv
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./_generate/
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* We are completely uploaded and fine
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< HTTP/1.1 200 OK
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* Closing connection 0
ok
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] emailext
An attempt to send an e-mail to empty list of recipients, ignored.
[Pipeline] dir
Running in /home/jenkins-agent/work/workspace/borg_release_3.0_2/jenkins-borg-release%2F3.0-21
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] dir
Running in /home/jenkins-agent/work/workspace/borg_release_3.0_2@tmp
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withCredentials
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
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