is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Command 'LINKER_OPTIMIZATION_HINT' not parsed!
is not an ELF
Command 'LINKER_OPTIMIZATION_HINT' not parsed!
Relocation #31 of __text seems corrupted
Relocation #33 of __text seems corrupted
is not an ELF
Command 'LINKER_OPTIMIZATION_HINT' not parsed!
is not an ELF
Command 'LINKER_OPTIMIZATION_HINT' not parsed!
Relocation #36 of __text seems corrupted
Relocation #38 of __text seems corrupted
Relocation #40 of __text seems corrupted
Relocation #42 of __text seems corrupted
Relocation #44 of __text seems corrupted
is not an ELF
Command 'LINKER_OPTIMIZATION_HINT' not parsed!
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Unknown format
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #9 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
Relocation #14 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #9 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
Relocation #14 of __text seems corrupted
Relocation #16 of __text seems corrupted
Relocation #18 of __text seems corrupted
Relocation #19 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #14 of __text seems corrupted
Relocation #15 of __text seems corrupted
Relocation #17 of __text seems corrupted
Relocation #19 of __text seems corrupted
Relocation #21 of __text seems corrupted
Relocation #23 of __text seems corrupted
Relocation #25 of __text seems corrupted
Relocation #27 of __text seems corrupted
Relocation #29 of __text seems corrupted
Relocation #31 of __text seems corrupted
Relocation #33 of __text seems corrupted
Relocation #35 of __text seems corrupted
Relocation #38 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Unknown format
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #9 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
Relocation #14 of __text seems corrupted
Relocation #16 of __text seems corrupted
Relocation #18 of __text seems corrupted
Relocation #19 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #9 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
Relocation #13 of __text seems corrupted
Relocation #14 of __text seems corrupted
Relocation #15 of __text seems corrupted
Relocation #16 of __text seems corrupted
Relocation #17 of __text seems corrupted
Relocation #18 of __text seems corrupted
Relocation #19 of __text seems corrupted
Relocation #20 of __text seems corrupted
Relocation #21 of __text seems corrupted
Relocation #22 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #2 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #3 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #9 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #10 of __text seems corrupted
Relocation #11 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #8 of __text seems corrupted
Relocation #11 of __text seems corrupted
Relocation #12 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
Relocation #6 of __text seems corrupted
Relocation #7 of __text seems corrupted
Relocation #14 of __text seems corrupted
Relocation #15 of __text seems corrupted
Relocation #17 of __text seems corrupted
Relocation #19 of __text seems corrupted
Relocation #21 of __text seems corrupted
Relocation #23 of __text seems corrupted
Relocation #25 of __text seems corrupted
Relocation #27 of __text seems corrupted
Relocation #29 of __text seems corrupted
Relocation #31 of __text seems corrupted
Relocation #33 of __text seems corrupted
Relocation #35 of __text seems corrupted
Relocation #38 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #1 of __text seems corrupted
Relocation #2 of __text seems corrupted
Relocation #4 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
Relocation #5 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
Relocation #0 of __text seems corrupted
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
is not an ELF
compiling .pyc files...
number of files: 31
WARNING :: Failed to get_static_lib_exports(/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/_build_env/lib/clang/14.0.4/lib/libclang_rt.cc_kext_i386_osx.a)
WARNING :: Failed to get_static_lib_exports(/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/_build_env/lib/clang/14.0.4/lib/libclang_rt.builtins_i386_osx.a)
INFO: sysroot: '/System/Library/Frameworks/' files: '['vmnet.framework/Versions/A/_CodeSignature/CodeResources', 'vmnet.framework/Versions/A/Resources/version.plist', 'vmnet.framework/Versions/A/Resources/en.lproj/InfoPlist.strings', 'vmnet.framework/Versions/A/Resources/Info.plist']'
INFO: sysroot: '/usr/lib/' files: '['zsh/5.8.1/zsh/zselect.so', 'zsh/5.8.1/zsh/zpty.so', 'zsh/5.8.1/zsh/zprof.so', 'zsh/5.8.1/zsh/zleparameter.so']'
INFO: sysroot: '/opt/X11/' files: '[]'
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libboost_program_options.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,bin/borg_help): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libboost_program_options.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libz.1.dylib found in conda-forge::libzlib-1.2.12-ha287fd2_2
INFO (aquila_borg,bin/borg_forward): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,bin/hades3): Needed DSO lib/libboost_random.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/hades3): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/hades3): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/hades3): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,bin/hades3): Needed DSO lib/libz.1.dylib found in conda-forge::libzlib-1.2.12-ha287fd2_2
INFO (aquila_borg,bin/hades3): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/hades3): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/hades3): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,bin/hades3): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libboost_random.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libz.1.dylib found in conda-forge::libzlib-1.2.12-ha287fd2_2
INFO (aquila_borg,bin/hades_python): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libpython3.8.dylib found in conda-forge::python-3.8.13-hd3575e6_0_cpython
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libboost_program_options.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/borg2gadget3): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
INFO (aquila_borg,bin/ares3): Needed DSO lib/libboost_random.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/ares3): Needed DSO lib/libhdf5_cpp.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/ares3): Needed DSO lib/libhdf5.200.dylib found in conda-forge::hdf5-1.12.1-nompi_hd9dbc9e_104
INFO (aquila_borg,bin/ares3): Needed DSO lib/libgsl.25.dylib found in conda-forge::gsl-2.7-h6e638da_0
INFO (aquila_borg,bin/ares3): Needed DSO lib/libz.1.dylib found in conda-forge::libzlib-1.2.12-ha287fd2_2
INFO (aquila_borg,bin/ares3): Needed DSO /System/Library/Frameworks/libSystem.B.dylib found in $SYSROOT
INFO (aquila_borg,bin/ares3): Needed DSO lib/libboost_chrono.dylib found in conda-forge::boost-cpp-1.77.0-hb428463_2
INFO (aquila_borg,bin/ares3): Needed DSO lib/libomp.dylib found in conda-forge::llvm-openmp-14.0.4-hd125106_0
Importing conda-verify failed. Please be sure to test your packages. conda install conda-verify to make this message go away.
WARNING:conda_build.build:Importing conda-verify failed. Please be sure to test your packages. conda install conda-verify to make this message go away.
INFO (aquila_borg,bin/ares3): Needed DSO lib/libc++.1.dylib found in conda-forge::libcxx-14.0.6-h04bba0f_0
WARNING (aquila_borg): run-exports library package conda-forge::numpy-1.19.5-py38he594345_3 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::cffi-1.15.1-py38h0e10f82_0 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::healpy-1.16.1-py38ha661eed_0 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::pyfftw-0.12.0-py38h22c8ccb_3 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::h5py-3.6.0-nompi_py38hacf61ce_100 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
Fixing permissions
INFO :: Time taken to mark (prefix)
0 replacements in 0 files was 0.07 seconds
Files containing CONDA_PREFIX
-----------------------------
bin/ares3 (binary): Patching
bin/borg2gadget3 (binary): Patching
bin/borg_forward (binary): Patching
bin/borg_help (binary): Patching
bin/hades3 (binary): Patching
bin/hades_python (binary): Patching
lib/python3.8/site-packages/aquila_borg/_borg.cpython-38-darwin.so (binary): Patching
TEST START: /Users/jenkins/miniconda3/envs/builder/conda-bld/osx-arm64/aquila_borg-3.0.1.13-nompi_py38hb41afc9_100.tar.bz2
Renaming work directory '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work' to '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64'
INFO:conda_build.utils:Renaming work directory '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work' to '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64'
shutil.move(work)=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work, dest=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64)
INFO:conda_build.utils:shutil.move(work)=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work, dest=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64)
/Users/jenkins/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_MPI' is being passed through with value 'nompi'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
/Users/jenkins/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_PREDOWNLOAD' is being passed through with value '/Users/jenkins/borg_downloads'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehol
The following NEW packages will be INSTALLED:
aquila_borg: 3.0.1.13-nompi_py38hb41afc9_100 local
astropy: 5.1-py38hd91e067_0 conda-forge
attrs: 22.1.0-pyh71513ae_1 conda-forge
boost-cpp: 1.77.0-hb428463_2 conda-forge
brotli: 1.0.9-h1c322ee_7 conda-forge
brotli-bin: 1.0.9-h1c322ee_7 conda-forge
bzip2: 1.0.8-h3422bc3_4 conda-forge
c-ares: 1.18.1-h3422bc3_0 conda-forge
ca-certificates: 2022.6.15-h4653dfc_0 conda-forge
cached-property: 1.5.2-hd8ed1ab_1 conda-forge
cached_property: 1.5.2-pyha770c72_1 conda-forge
certifi: 2022.6.15-py38h10201cd_0 conda-forge
cffi: 1.15.1-py38h0e10f82_0 conda-forge
cfitsio: 4.1.0-hd4f5c17_0 conda-forge
cycler: 0.11.0-pyhd8ed1ab_0 conda-forge
deprecated: 1.2.13-pyh6c4a22f_0 conda-forge
fftw: 3.3.10-nompi_h2e33b67_103 conda-forge
fonttools: 4.35.0-py38hbe6f924_0 conda-forge
freetype: 2.12.1-hd633e50_0 conda-forge
gsl: 2.7-h6e638da_0 conda-forge
h5py: 3.6.0-nompi_py38hacf61ce_100 conda-forge
hdf5: 1.12.1-nompi_hd9dbc9e_104 conda-forge
healpy: 1.16.1-py38ha661eed_0 conda-forge
icu: 70.1-h6b3803e_0 conda-forge
importlib-metadata: 4.11.4-py38h10201cd_0 conda-forge
iniconfig: 1.1.1-pyh9f0ad1d_0 conda-forge
jpeg: 9e-he4db4b2_2 conda-forge
kiwisolver: 1.4.4-py38haa2428a_0 conda-forge
krb5: 1.19.3-he492e65_0 conda-forge
lcms2: 2.12-had6a04f_0 conda-forge
lerc: 4.0.0-h9a09cb3_0 conda-forge
libblas: 3.9.0-16_osxarm64_openblas conda-forge
libbrotlicommon: 1.0.9-h1c322ee_7 conda-forge
libbrotlidec: 1.0.9-h1c322ee_7 conda-forge
libbrotlienc: 1.0.9-h1c322ee_7 conda-forge
libcblas: 3.9.0-16_osxarm64_openblas conda-forge
libcurl: 7.83.1-h7965298_0 conda-forge
libcxx: 14.0.6-h04bba0f_0 conda-forge
libdeflate: 1.13-h57fd34a_0 conda-forge
libedit: 3.1.20191231-hc8eb9b7_2 conda-forge
libev: 4.33-h642e427_1 conda-forge
libffi: 3.4.2-h3422bc3_5 conda-forge
libgfortran: 5.0.0.dev0-11_0_1_hf114ba7_23 conda-forge
libgfortran5: 11.0.1.dev0-hf114ba7_23 conda-forge
liblapack: 3.9.0-16_osxarm64_openblas conda-forge
libnghttp2: 1.47.0-h519802c_1 conda-forge
libopenblas: 0.3.21-openmp_hcb59c3b_0 conda-forge
libpng: 1.6.37-h9b2ccdc_4 conda-forge
libsqlite: 3.39.2-h2c9beb0_1 conda-forge
libssh2: 1.10.0-h7a5bd25_3 conda-forge
libtiff: 4.4.0-hd6ca8d7_3 conda-forge
libwebp-base: 1.2.4-h57fd34a_0 conda-forge
libxcb: 1.13-h9b22ae9_1004 conda-forge
libzlib: 1.2.12-ha287fd2_2 conda-forge
llvm-openmp: 14.0.4-hd125106_0 conda-forge
lz4-c: 1.9.3-hbdafb3b_1 conda-forge
matplotlib-base: 3.5.3-py38hffd4f37_0 conda-forge
munkres: 1.1.4-pyh9f0ad1d_0 conda-forge
ncurses: 6.3-h07bb92c_1 conda-forge
numpy: 1.23.1-py38he1fcd3f_0 conda-forge
openjpeg: 2.5.0-h5d4e404_1 conda-forge
openssl: 3.0.5-h7aea29f_1 conda-forge
packaging: 21.3-pyhd8ed1ab_0 conda-forge
pillow: 9.2.0-py38h96fe7ce_2 conda-forge
pip: 22.2.2-pyhd8ed1ab_0 conda-forge
pluggy: 1.0.0-py38h10201cd_3 conda-forge
pthread-stubs: 0.4-h27ca646_1001 conda-forge
py: 1.11.0-pyh6c4a22f_0 conda-forge
pycparser: 2.21-pyhd8ed1ab_0 conda-forge
pyerfa: 2.0.0.1-py38hcd20c4b_2 conda-forge
pyfftw: 0.12.0-py38h22c8ccb_3 conda-forge
pyparsing: 3.0.9-pyhd8ed1ab_0 conda-forge
pytest: 7.1.2-py38h10201cd_0 conda-forge
pytest-runner: 6.0.0-pyhd8ed1ab_0 conda-forge
python: 3.8.13-hd3575e6_0_cpython conda-forge
python-dateutil: 2.8.2-pyhd8ed1ab_0 conda-forge
python_abi: 3.8-2_cp38 conda-forge
pyyaml: 6.0-py38h33210d7_4 conda-forge
readline: 8.1.2-h46ed386_0 conda-forge
scipy: 1.9.0-py38h4f188a7_0 conda-forge
setuptools: 65.0.1-py38h10201cd_0 conda-forge
six: 1.16.0-pyh6c4a22f_0 conda-forge
sqlite: 3.39.2-h40dfcc0_1 conda-forge
tk: 8.6.12-he1e0b03_0 conda-forge
tomli: 2.0.1-pyhd8ed1ab_0 conda-forge
unicodedata2: 14.0.0-py38h33210d7_1 conda-forge
wheel: 0.37.1-pyhd8ed1ab_0 conda-forge
wrapt: 1.14.1-py38he5c2ac2_0 conda-forge
xorg-libxau: 1.0.9-h27ca646_0 conda-forge
xorg-libxdmcp: 1.1.3-h27ca646_0 conda-forge
xz: 5.2.6-h57fd34a_0 conda-forge
yaml: 0.2.5-h3422bc3_2 conda-forge
zipp: 3.8.1-pyhd8ed1ab_0 conda-forge
zlib: 1.2.12-ha287fd2_2 conda-forge
zstd: 1.5.2-h68b4297_4 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
export PREFIX=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehol
export SRC_DIR=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/test_tmp
Initializing console.
import: 'aquila_borg'
[INFO ] libLSS version 7c7f8cc68b3557080378aacc7e0375cc495977c9 built-in modules
[INFO ] Registering data IO converters
[INFO S ] Registered forward models:
[INFO S ] 2LPT_CIC, 2LPT_CIC_OPENMP, 2LPT_DOUBLE, 2LPT_NGP, ALTAIR_AP, Downgrade
[INFO S ] EnforceMass, HADES_LOG, HADES_PT, Haar, LPT_CIC, LPT_CIC_OPENMP, LPT_DOUBLE
[INFO S ] LPT_NGP, LPT_NU_CIC, LPT_NU_CIC_OPENMP, PATCH_MODEL, PM_CIC, PM_CIC_OPENMP
[INFO S ] PM_CIC_OPENMP2, PRIMORDIAL, PRIMORDIAL_AS, PRIMORDIAL_FNL, QLPT, QLPT_RSD
[INFO S ] Softplus, TRANSFER_CLASS, TRANSFER_EHU, Transfer, Upgrade, bias::BrokenPowerLaw
[INFO S ] bias::BrokenPowerLawSigmoid, bias::DoubleBrokenPowerLaw, bias::EFT, bias::EFT_Thresh
[INFO S ] bias::Linear, bias::ManyPower_1^1, bias::ManyPower_1^2, bias::ManyPower_1^4
[INFO S ] bias::ManyPower_2^2, bias::Noop, bias::PowerLaw
[INFO S ] Registered forward models (v3):
[INFO S ] KappaSphere
[INFO S ] Registered likelihoods:
[INFO S ] BORG_NULL, BORG_POISSON, BORG_REDUCED_SHEAR, BORG_SHEAR, BORG_STUDENT_T
[INFO S ] EFT_BIAS_LIKE, EFT_BIAS_MARG_LIKE, GAUSSIAN_BROKEN_POWER_LAW_BIAS, GAUSSIAN_LINEAR_BIAS
[INFO S ] GAUSSIAN_MO_WHITE_BIAS, GAUSSIAN_POWER_LAW_BIAS, GENERIC_GAUSSIAN_MANY_POWER_1^1
[INFO S ] GENERIC_GAUSSIAN_MANY_POWER_1^2, GENERIC_POISSON_BROKEN_POWERLAW_BIAS
[INFO S ] GENERIC_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS, GENERIC_POISSON_MANY_POWER_1^1
[INFO S ] GENERIC_POISSON_MANY_POWER_1^2, GENERIC_POISSON_MANY_POWER_1^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MANY_POWER_2^2, GENERIC_POISSON_MANY_POWER_2^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MO_WHITE_BIAS, GENERIC_POISSON_POWERLAW_BIAS, GENERIC_POISSON_POWERLAW_BIAS_DEGRADE4
[INFO S ] HADES_LINEAR, NOOP_POISSON, OCT_LIKELIHOOD, OCT_LIKELIHOOD_MARG, POISSON
[INFO S ] ROBUST_POISSON_BROKEN_POWERLAW_BIAS, ROBUST_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS
[INFO S ] ROBUST_POISSON_MANY_POWER_1^1, ROBUST_POISSON_MANY_POWER_1^2, ROBUST_POISSON_POWERLAW_BIAS
[INFO S ] ARES3 base version 7c7f8cc68b3557080378aacc7e0375cc495977c9
[INFO S ] GIT report
[INFO S ] - Module: root, Version: 7c7f8cc68b3557080378aacc7e0375cc495977c9
[INFO S ]
[INFO S ]
[INFO ] CPU features:
import: 'aquila_borg'
Resource usage statistics from testing aquila_borg:
Process count: 3
CPU time: Sys=0:00:00.1, User=0:00:00.2
Memory: 49.6M
Disk usage: 56B
Time elapsed: 0:00:06.1
TEST END: /Users/jenkins/miniconda3/envs/builder/conda-bld/osx-arm64/aquila_borg-3.0.1.13-nompi_py38hb41afc9_100.tar.bz2
Renaming work directory '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work' to '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64_main_build_loop'
INFO:conda_build.utils:Renaming work directory '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work' to '/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64_main_build_loop'
shutil.move(work)=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work, dest=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64_main_build_loop)
INFO:conda_build.utils:shutil.move(work)=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work, dest=/Users/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962475/work_moved_aquila_borg-3.0.1.13-nompi_py38hb41afc9_100_osx-arm64_main_build_loop)
# Automatic uploading is disabled
# If you want to upload package(s) to anaconda.org later, type:
# To have conda build upload to anaconda.org automatically, use
# conda config --set anaconda_upload yes
anaconda upload \
/Users/jenkins/miniconda3/envs/builder/conda-bld/osx-arm64/aquila_borg-3.0.1.13-nompi_py38hb41afc9_100.tar.bz2
anaconda_upload is not set. Not uploading wheels: []
INFO :: The inputs making up the hashes for the built packages are as follows:
{
"aquila_borg-3.0.1.13-nompi_py38hb41afc9_100": {
"recipe": {
"boost": "1.77",
"c_compiler": "clang",
"c_compiler_version": "14",
"cxx_compiler": "clangxx",
"cxx_compiler_version": "14",
"gsl": "2.7",
"llvm_openmp": "14",
"mpi": "nompi",
"numpy": "1.19",
"target_platform": "osx-arm64"
}
}
}
####################################################################################
Resource usage summary:
Total time: 0:16:30.9
CPU usage: sys=0:00:20.0, user=0:07:49.5
Maximum memory usage observed: 1.5G
Total disk usage observed (not including envs): 1.7M
####################################################################################
Source and build intermediates have been left in /Users/jenkins/miniconda3/envs/builder/conda-bld.
There are currently 1 accumulated.
To remove them, you can run the ```conda build purge``` command
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 73566 killed;
[ssh-agent] Stopped.
[Pipeline] // sshagent
[Pipeline] }
[Pipeline] // ansiColor
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Build MacOS-x86)
[Pipeline] node
Running on macos-x86 in /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential jenkins_bitbucket
Fetching changes from the remote Git repository
Fetching without tags
> git rev-parse --resolve-git-dir /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0/.git # timeout=10
> git config remote.origin.url git@bitbucket.org:aquila-consortium/borg_conda # timeout=10
Fetching upstream changes from git@bitbucket.org:aquila-consortium/borg_conda
> git --version # timeout=10
> git --version # 'git version 2.32.1 (Apple Git-133)'
using GIT_SSH to set credentials bitbucket access
Verifying host key using known hosts file, will automatically accept unseen keys
> git fetch --no-tags --force --progress -- git@bitbucket.org:aquila-consortium/borg_conda +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision b8a596cc8719c08ce6595c6362c1756477cd5b8e (release/3.0)
Commit message: "Impose some constraints"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] ansiColor
[Pipeline] {
[Pipeline] sshagent
[ssh-agent] Using credentials lavaux (bitbucket access)
[ssh-agent] Looking for ssh-agent implementation...
[ssh-agent] Exec ssh-agent (binary ssh-agent on a remote machine)
$ ssh-agent
SSH_AUTH_SOCK=/var/folders/4d/l5p4jwcd6j35zzcl03nbxj_40000gr/T//ssh-MfUUSuQMHKrY/agent.25325
SSH_AGENT_PID=25326
Running ssh-add (command line suppressed)
Identity added: /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0@tmp/private_key_17552600768334451809.key (lavaux@legolas)
> git config core.sparsecheckout # timeout=10
> git checkout -f b8a596cc8719c08ce6595c6362c1756477cd5b8e # timeout=10
[ssh-agent] Started.
[Pipeline] {
[Pipeline] timeout
Timeout set to expire in 16 hr
[Pipeline] {
[Pipeline] sh
+ . /Users/jenkins-x86/miniconda3/etc/profile.d/conda.sh
++ export CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ '[' -z '' ']'
++ export CONDA_SHLVL=0
++ CONDA_SHLVL=0
++ '[' -n '' ']'
++++ dirname /Users/jenkins-x86/miniconda3/bin/conda
+++ dirname /Users/jenkins-x86/miniconda3/bin
++ PATH=/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ '[' -z '' ']'
++ PS1=
+ export BORG_PREDOWNLOAD=/Users/jenkins-x86/borg_downloads
+ BORG_PREDOWNLOAD=/Users/jenkins-x86/borg_downloads
+ conda activate builder
+ local cmd=activate
+ case "$cmd" in
+ __conda_activate activate builder
+ '[' -n '' ']'
+ local ask_conda
++ PS1=
++ __conda_exe shell.posix activate builder
++ __add_sys_prefix_to_path
++ '[' -n '' ']'
+++ dirname /Users/jenkins-x86/miniconda3/bin/conda
++ SYSP=/Users/jenkins-x86/miniconda3/bin
+++ dirname /Users/jenkins-x86/miniconda3/bin
++ SYSP=/Users/jenkins-x86/miniconda3
++ '[' -n '' ']'
++ PATH=/Users/jenkins-x86/miniconda3/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ /Users/jenkins-x86/miniconda3/bin/conda shell.posix activate builder
+ ask_conda='PS1='\''(builder) '\''
export PATH='\''/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins-x86/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins-x86/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins-x86/miniconda3/bin/python'\'''
+ eval 'PS1='\''(builder) '\''
export PATH='\''/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins-x86/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins-x86/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins-x86/miniconda3/bin/python'\'''
++ PS1='(builder) '
++ export PATH=/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ PATH=/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export CONDA_PREFIX=/Users/jenkins-x86/miniconda3/envs/builder
++ CONDA_PREFIX=/Users/jenkins-x86/miniconda3/envs/builder
++ export CONDA_SHLVL=1
++ CONDA_SHLVL=1
++ export CONDA_DEFAULT_ENV=builder
++ CONDA_DEFAULT_ENV=builder
++ export 'CONDA_PROMPT_MODIFIER=(builder) '
++ CONDA_PROMPT_MODIFIER='(builder) '
++ export CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
+ __conda_hashr
+ '[' -n '' ']'
+ '[' -n '' ']'
+ hash -r
+ rm -f conda.tgz
+ ulimit -a
core file size (blocks, -c) 0
data seg size (kbytes, -d) unlimited
file size (blocks, -f) unlimited
max locked memory (kbytes, -l) unlimited
max memory size (kbytes, -m) unlimited
open files (-n) 10240
pipe size (512 bytes, -p) 1
stack size (kbytes, -s) 8176
cpu time (seconds, -t) unlimited
max user processes (-u) 2666
virtual memory (kbytes, -v) unlimited
+ conda-build .
No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.16
WARNING:conda_build.metadata:No numpy version specified in conda_build_config.yaml. Falling back to default numpy value of 1.16
From bitbucket.org:aquila-consortium/borg
d6d486ff..225b2d47 main -> main
b4e1ebad..7c7f8cc6 release/3.0 -> release/3.0
Cloning into '/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work'...
done.
Switched to a new branch 'release/3.0'
branch 'release/3.0' set up to track 'origin/release/3.0'.
Submodule 'external/cosmotool' (https://bitbucket.org/glavaux/cosmotool.git) registered for path 'external/cosmotool'
Cloning into '/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work/external/cosmotool'...
Submodule path 'external/cosmotool': checked out '31d0f194081efe4ae3c4f8109dd05c33056c8b4e'
commit 7c7f8cc68b3557080378aacc7e0375cc495977c9
Author: Guilhem Lavaux <guilhem.lavaux@iap.fr>
Date: Tue Aug 16 18:51:24 2022 +0300
Use a persistent object for Box in case python user want to keep it
v3.0.1-13-g7c7f8cc6
On branch release/3.0
Your branch is up to date with 'origin/release/3.0'.
nothing to commit, working tree clean
checkout: 'release/3.0'
==> /Users/jenkins-x86/miniconda3/envs/builder/bin/git log -n1 <==
==> /Users/jenkins-x86/miniconda3/envs/builder/bin/git describe --tags --dirty <==
==> /Users/jenkins-x86/miniconda3/envs/builder/bin/git status <==
Adding in variants from internal_defaults
INFO:conda_build.variants:Adding in variants from internal_defaults
Adding in variants from /Users/jenkins-x86/.conda/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /Users/jenkins-x86/.conda/conda_build_config.yaml
Adding in variants from /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0/conda_build_config.yaml
INFO:conda_build.variants:Adding in variants from /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0/conda_build_config.yaml
/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_MPI' is being passed through with value 'nompi'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_PREDOWNLOAD' is being passed through with value '/Users/jenkins-x86/borg_downloads'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
Attempting to finalize metadata for aquila_borg
INFO:conda_build.metadata:Attempting to finalize metadata for aquila_borg
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): conda.anaconda.org:443
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/repodata.json HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/noarch/repodata.json HTTP/1.1" 200 None
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./mach.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./config.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadGadget.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./eskow.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadRamses.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./tf_fit.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./dinterpolate.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./newton.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./openmp.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions_ser.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/numeric
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/Example.cpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_tools.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/algorithm
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_ser.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/License.txt
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm_ser.h
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/.
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./octTree.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sphSmooth.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bqueue.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./dinterpolate.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bsp_simple.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./mykdtree.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./kdtree_leaf.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sparseGrid.tcc
-- Installing: $SRC_DIR/build/ext_install/bin/simple3DFilter
-- Installing: $SRC_DIR/build/ext_install/bin/simpleDistanceFilter
[ 27%] Completed 'cosmotool'
[ 27%] Built target cosmotool
[ 27%] Building CXX object libLSS/CMakeFiles/LSS.dir/ares_version.cpp.o
[ 27%] Building CXX object libLSS/CMakeFiles/LSS.dir/borg_version.cpp.o
[ 27%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/color_mod.cpp.o
[ 27%] Building CXX object libLSS/CMakeFiles/LSS.dir/data/galaxies.cpp.o
[ 27%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/cosmo.cpp.o
[ 30%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/class_cosmo.cpp.o
[ 30%] Building CXX object libLSS/CMakeFiles/LSS.dir/mcmc/state_element.cpp.o
[ 30%] Building CXX object libLSS/CMakeFiles/LSS.dir/mcmc/global_state.cpp.o
[ 30%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/static_init.cpp.o
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[ 32%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/sigcatcher.cpp.o
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[ 32%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/hdf5_error.cpp.o
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[ 35%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/powerspectrum/measure.cpp.o
[ 35%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/sort/peano.cpp.o
[ 35%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/gibbs_messenger.cpp.o
[ 37%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/powerspectrum_a_sampler.cpp.o
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[ 37%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/powerspectrum_c_sampler.cpp.o
[ 37%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/linbias_sampler.cpp.o
[ 37%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/synthetic_selection.cpp.o
[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/negative_foreground_sampler.cpp.o
[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/main_loop.cpp.o
[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/markov.cpp.o
[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/gig_sampler.cc.o
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[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/gridLikelihoodBase.cpp.o
[ 42%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/registry.cpp.o
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[ 45%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/borg/borg_poisson_likelihood.cpp.o
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[ 45%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/borg/borg_null_likelihood.cpp.o
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[ 45%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/rgen/hmc/hmc_density_sampler.cpp.o
[ 45%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/rgen/ao-hmc/ao_hmc_density_sampler.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/model_io.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forward_model.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/data_representation.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/converters.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/tiledarray_representation.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/modelio_representation.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/primordial.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/primordial_as.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/fnl.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer_ehu.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer_class.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/registry.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/chain_forward_model.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/branch.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/sum.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/haar.cpp.o
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): repo.anaconda.com:443
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/main/osx-64/repodata.json HTTP/1.1" 304 0
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/main/noarch/repodata.json HTTP/1.1" 304 0
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/r/osx-64/repodata.json HTTP/1.1" 304 0
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/r/noarch/repodata.json HTTP/1.1" 304 0
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/main/channeldata.json HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:https://repo.anaconda.com:443 "GET /pkgs/r/channeldata.json HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/channeldata.json HTTP/1.1" 200 None
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_lpt.cpp:23:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_lpt_neutrino.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_lpt_neutrino.cpp:22:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Solving environment: ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_qlpt.hpp:24,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_qlpt.cpp:26:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Collecting package metadata (repodata.json): ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_qlpt_rsd.hpp:24,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_qlpt_rsd.cpp:26:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_multi_pm.hpp:19,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_multi_pm.cpp:14:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Solving environment: ...working... done
BUILD START: ['aquila_borg-3.0.1.13-nompi_py38h222046b_100.tar.bz2']
Collecting package metadata (repodata.json): ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_2lpt.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_2lpt.cpp:25:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Solving environment: ...working... done
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/freetype-2.12.1-h3f81eb7_0.tar.bz2 HTTP/1.1" 200 936892
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/libnghttp2-1.47.0-h5aae05b_1.tar.bz2 HTTP/1.1" 200 896184
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/pillow-9.2.0-py38h7bff4d5_2.tar.bz2 HTTP/1.1" 200 47205032
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/setuptools-65.0.1-py38h50d1736_0.tar.bz2 HTTP/1.1" 200 1400480
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/fonttools-4.35.0-py38h35d34b1_0.tar.bz2 HTTP/1.1" 200 1905421
DEBUG:urllib3.connectionpool:https://conda.anaconda.org:443 "GET /conda-forge/osx-64/matplotlib-base-3.5.3-py38h2894597_0.tar.bz2 HTTP/1.1" 200 7791864
## Package Plan ##
environment location: /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold
The following NEW packages will be INSTALLED:
astropy: 5.1-py38hc1426ef_0 conda-forge
attrs: 22.1.0-pyh71513ae_1 conda-forge
boost-cpp: 1.77.0-h179ae3a_2 conda-forge
brotli: 1.0.9-h5eb16cf_7 conda-forge
brotli-bin: 1.0.9-h5eb16cf_7 conda-forge
bzip2: 1.0.8-h0d85af4_4 conda-forge
c-ares: 1.18.1-h0d85af4_0 conda-forge
ca-certificates: 2022.6.15-h033912b_0 conda-forge
cached-property: 1.5.2-hd8ed1ab_1 conda-forge
cached_property: 1.5.2-pyha770c72_1 conda-forge
certifi: 2022.6.15-py38h50d1736_0 conda-forge
cffi: 1.15.1-py38h86886aa_0 conda-forge
cfitsio: 4.1.0-h2c97ad1_0 conda-forge
cycler: 0.11.0-pyhd8ed1ab_0 conda-forge
cython: 0.29.32-py38h1c67a95_0 conda-forge
fftw: 3.3.10-nompi_h6e8bf23_103 conda-forge
fonttools: 4.35.0-py38h35d34b1_0 conda-forge
freetype: 2.12.1-h3f81eb7_0 conda-forge
gsl: 2.7-h93259b0_0 conda-forge
h5py: 3.7.0-nompi_py38ha2d691f_100 conda-forge
hdf5: 1.12.1-nompi_h0aa1fa2_104 conda-forge
healpy: 1.16.1-py38h678f2dd_0 conda-forge
icu: 70.1-h96cf925_0 conda-forge
importlib-metadata: 4.11.4-py38h50d1736_0 conda-forge
iniconfig: 1.1.1-pyh9f0ad1d_0 conda-forge
jpeg: 9e-hac89ed1_2 conda-forge
kiwisolver: 1.4.4-py38hf58141a_0 conda-forge
krb5: 1.19.3-hb98e516_0 conda-forge
lcms2: 2.12-h577c468_0 conda-forge
lerc: 4.0.0-hb486fe8_0 conda-forge
libblas: 3.9.0-16_osx64_openblas conda-forge
libbrotlicommon: 1.0.9-h5eb16cf_7 conda-forge
libbrotlidec: 1.0.9-h5eb16cf_7 conda-forge
libbrotlienc: 1.0.9-h5eb16cf_7 conda-forge
libcblas: 3.9.0-16_osx64_openblas conda-forge
libcurl: 7.83.1-h23f1065_0 conda-forge
libcxx: 14.0.6-hce7ea42_0 conda-forge
libdeflate: 1.13-h775f41a_0 conda-forge
libedit: 3.1.20191231-h0678c8f_2 conda-forge
libev: 4.33-haf1e3a3_1 conda-forge
libffi: 3.4.2-h0d85af4_5 conda-forge
libgfortran: 5.0.0-9_3_0_h6c81a4c_23 conda-forge
libgfortran5: 9.3.0-h6c81a4c_23 conda-forge
liblapack: 3.9.0-16_osx64_openblas conda-forge
libnghttp2: 1.47.0-h5aae05b_1 conda-forge
libopenblas: 0.3.21-openmp_h1027af7_0 conda-forge
libpng: 1.6.37-h5481273_4 conda-forge
libsqlite: 3.39.2-h5a3d3bf_1 conda-forge
libssh2: 1.10.0-h47af595_3 conda-forge
libtiff: 4.4.0-h5e0c7b4_3 conda-forge
libwebp-base: 1.2.4-h775f41a_0 conda-forge
libxcb: 1.13-h0d85af4_1004 conda-forge
libzlib: 1.2.12-hfe4f2af_2 conda-forge
llvm-openmp: 14.0.4-ha654fa7_0 conda-forge
lz4-c: 1.9.3-he49afe7_1 conda-forge
matplotlib-base: 3.5.3-py38h2894597_0 conda-forge
munkres: 1.1.4-pyh9f0ad1d_0 conda-forge
ncurses: 6.3-h96cf925_1 conda-forge
numpy: 1.19.5-py38h5cb586d_3 conda-forge
openjpeg: 2.5.0-h5d0d7b0_1 conda-forge
openssl: 3.0.5-hb81d4ab_1 conda-forge
packaging: 21.3-pyhd8ed1ab_0 conda-forge
pillow: 9.2.0-py38h7bff4d5_2 conda-forge
pip: 22.2.2-pyhd8ed1ab_0 conda-forge
pkg-config: 0.29.2-hf5063d0_2 conda-forge
pkgconfig: 1.5.5-py38h50d1736_2 conda-forge
pluggy: 1.0.0-py38h50d1736_3 conda-forge
pthread-stubs: 0.4-hc929b4f_1001 conda-forge
py: 1.11.0-pyh6c4a22f_0 conda-forge
pycparser: 2.21-pyhd8ed1ab_0 conda-forge
pyerfa: 2.0.0.1-py38h4277f33_2 conda-forge
pyfftw: 0.13.0-py38hf16c043_2 conda-forge
pyparsing: 3.0.9-pyhd8ed1ab_0 conda-forge
pytest: 7.1.2-py38h50d1736_0 conda-forge
pytest-runner: 6.0.0-pyhd8ed1ab_0 conda-forge
python: 3.8.13-h66c20e1_0_cpython conda-forge
python-dateutil: 2.8.2-pyhd8ed1ab_0 conda-forge
python_abi: 3.8-2_cp38 conda-forge
pyyaml: 6.0-py38hed1de0f_4 conda-forge
readline: 8.1.2-h3899abd_0 conda-forge
scipy: 1.9.0-py38hb261484_0 conda-forge
setuptools: 65.0.1-py38h50d1736_0 conda-forge
six: 1.16.0-pyh6c4a22f_0 conda-forge
sqlite: 3.39.2-hd9f0692_1 conda-forge
tk: 8.6.12-h5dbffcc_0 conda-forge
tomli: 2.0.1-pyhd8ed1ab_0 conda-forge
unicodedata2: 14.0.0-py38hed1de0f_1 conda-forge
wheel: 0.37.1-pyhd8ed1ab_0 conda-forge
xorg-libxau: 1.0.9-h35c211d_0 conda-forge
xorg-libxdmcp: 1.1.3-h35c211d_0 conda-forge
xz: 5.2.6-h775f41a_0 conda-forge
yaml: 0.2.5-h0d85af4_2 conda-forge
zipp: 3.8.1-pyhd8ed1ab_0 conda-forge
zlib: 1.2.12-hfe4f2af_2 conda-forge
zstd: 1.5.2-hb844be6_4 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Collecting package metadata (repodata.json): ...working... done
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/patch_model.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
Solving environment: ...working... done
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env
The following NEW packages will be INSTALLED:
autoconf: 2.69-pl5321hc0e15e3_11 conda-forge
automake: 1.16.5-pl5321h694c41f_0 conda-forge
bzip2: 1.0.8-h0d85af4_4 conda-forge
c-ares: 1.18.1-h0d85af4_0 conda-forge
ca-certificates: 2022.6.15-h033912b_0 conda-forge
cctools_osx-64: 973.0.1-h2b95895_10 conda-forge
clang: 14.0.4-h694c41f_0 conda-forge
clang-14: 14.0.4-default_h55ffa42_0 conda-forge
clang_osx-64: 14.0.4-h3a95cd4_2 conda-forge
clangxx: 14.0.4-default_h55ffa42_0 conda-forge
clangxx_osx-64: 14.0.4-he1dbc44_2 conda-forge
cmake: 3.24.0-h9c7736b_0 conda-forge
compiler-rt: 14.0.4-h7fcd477_0 conda-forge
compiler-rt_osx-64: 14.0.4-h6df654d_0 conda-forge
expat: 2.4.8-h96cf925_0 conda-forge
gettext: 0.19.8.1-hd1a6beb_1008 conda-forge
krb5: 1.19.3-hb98e516_0 conda-forge
ld64_osx-64: 609-h1e06c2b_10 conda-forge
libclang-cpp14: 14.0.4-default_h55ffa42_0 conda-forge
libcurl: 7.83.1-h23f1065_0 conda-forge
libcxx: 14.0.6-hce7ea42_0 conda-forge
libedit: 3.1.20191231-h0678c8f_2 conda-forge
libev: 4.33-haf1e3a3_1 conda-forge
libffi: 3.4.2-h0d85af4_5 conda-forge
libiconv: 1.16-haf1e3a3_0 conda-forge
libidn2: 2.3.3-hac89ed1_0 conda-forge
libllvm14: 14.0.4-h41df66c_0 conda-forge
libnghttp2: 1.47.0-h5aae05b_1 conda-forge
libssh2: 1.10.0-h47af595_3 conda-forge
libunistring: 0.9.10-h0d85af4_0 conda-forge
libuv: 1.44.2-hac89ed1_0 conda-forge
libzlib: 1.2.12-hfe4f2af_2 conda-forge
llvm-openmp: 14.0.4-ha654fa7_0 conda-forge
llvm-tools: 14.0.4-h41df66c_0 conda-forge
lz4-c: 1.9.3-he49afe7_1 conda-forge
m4: 1.4.18-haf1e3a3_1001 conda-forge
ncurses: 6.3-h96cf925_1 conda-forge
openssl: 3.0.5-hb81d4ab_1 conda-forge
perl: 5.32.1-2_h0d85af4_perl5 conda-forge
popt: 1.16-h7b079dc_2002 conda-forge
rhash: 1.4.3-hac89ed1_0 conda-forge
rsync: 3.2.3-h7841d2a_4 conda-forge
sigtool: 0.1.3-h88f4db0_0 conda-forge
tapi: 1100.0.11-h9ce4665_0 conda-forge
wget: 1.20.3-hd3787cc_1 conda-forge
xxhash: 0.8.0-h35c211d_3 conda-forge
xz: 5.2.6-h775f41a_0 conda-forge
zlib: 1.2.12-hfe4f2af_2 conda-forge
zstd: 1.5.2-hb844be6_4 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
source tree in: /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work
export PREFIX=/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold
export BUILD_PREFIX=/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env
export SRC_DIR=/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work
INFO: activate_clang_osx-64.sh made the following environmental changes:
+AR=x86_64-apple-darwin13.4.0-ar
+AS=x86_64-apple-darwin13.4.0-as
+CC=x86_64-apple-darwin13.4.0-clang
+CC_FOR_BUILD=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang
+CFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/aquila_borg-3.0.1.13 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix
+CHECKSYMS=x86_64-apple-darwin13.4.0-checksyms
+CLANG=x86_64-apple-darwin13.4.0-clang
+CMAKE_ARGS=-DCMAKE_AR=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_CXX_COMPILER_AR=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_C_COMPILER_AR=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_RANLIB=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_CXX_COMPILER_RANLIB=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_C_COMPILER_RANLIB=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_LINKER=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-ld -DCMAKE_STRIP=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-strip -DCMAKE_INSTALL_NAME_TOOL=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-install_name_tool -DCMAKE_LIBTOOL=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-libtool -DCMAKE_OSX_DEPLOYMENT_TARGET=10.9 -DCMAKE_BUILD_TYPE=Release -DCMAKE_OSX_SYSROOT=/opt/MacOSX10.10.sdk -DCMAKE_INSTALL_PREFIX=$PREFIX -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_PROGRAM_PATH=$BUILD_PREFIX/bin;$PREFIX/bin
+CMAKE_PREFIX_PATH=:$PREFIX
+CONDA_TOOLCHAIN_BUILD=x86_64-apple-darwin13.4.0
+CONDA_TOOLCHAIN_HOST=x86_64-apple-darwin13.4.0
+CPPFLAGS=-D_FORTIFY_SOURCE=2 -isystem $PREFIX/include -mmacosx-version-min=10.9
+DEBUG_CFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -Og -g -Wall -Wextra -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/aquila_borg-3.0.1.13 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix
+HOST=x86_64-apple-darwin13.4.0
+INSTALL_NAME_TOOL=x86_64-apple-darwin13.4.0-install_name_tool
+LD=x86_64-apple-darwin13.4.0-ld
+LDFLAGS=-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,$PREFIX/lib -L$PREFIX/lib
+LDFLAGS_LD=-pie -headerpad_max_install_names -dead_strip_dylibs -rpath $PREFIX/lib -L$PREFIX/lib
+LIBTOOL=x86_64-apple-darwin13.4.0-libtool
+LIPO=x86_64-apple-darwin13.4.0-lipo
+MESON_ARGS=--buildtype release --prefix=$PREFIX -Dlibdir=lib
+NM=x86_64-apple-darwin13.4.0-nm
+NMEDIT=x86_64-apple-darwin13.4.0-nmedit
+OBJC=x86_64-apple-darwin13.4.0-clang
+OBJC_FOR_BUILD=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang
+OTOOL=x86_64-apple-darwin13.4.0-otool
+PAGESTUFF=x86_64-apple-darwin13.4.0-pagestuff
+RANLIB=x86_64-apple-darwin13.4.0-ranlib
+REDO_PREBINDING=x86_64-apple-darwin13.4.0-redo_prebinding
+SDKROOT=/opt/MacOSX10.10.sdk
+SEGEDIT=x86_64-apple-darwin13.4.0-segedit
+SEG_ADDR_TABLE=x86_64-apple-darwin13.4.0-seg_addr_table
+SEG_HACK=x86_64-apple-darwin13.4.0-seg_hack
+SIZE=x86_64-apple-darwin13.4.0-size
+STRINGS=x86_64-apple-darwin13.4.0-strings
+STRIP=x86_64-apple-darwin13.4.0-strip
+_CONDA_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_apple_darwin13_4_0
+ac_cv_func_malloc_0_nonnull=yes
+ac_cv_func_realloc_0_nonnull=yes
+build_alias=x86_64-apple-darwin13.4.0
+host_alias=x86_64-apple-darwin13.4.0
INFO: activate_clangxx_osx-64.sh made the following environmental changes:
+CLANGXX=x86_64-apple-darwin13.4.0-clang++
+CXX=x86_64-apple-darwin13.4.0-clang++
+CXXFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/aquila_borg-3.0.1.13 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix
+CXX_FOR_BUILD=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang++
+DEBUG_CXXFLAGS=-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden -fmessage-length=0 -Og -g -Wall -Wextra -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/aquila_borg-3.0.1.13 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix
BORG_MPI is nompi
Ensure the current directory is ARES
-- Conda environment detected: installation default in $BUILD_PREFIX
Downloading http://heasarc.gsfc.nasa.gov/FTP/software/fitsio/c/cfitsio-4.0.0.tar.gz for CFITSIO_URL to CFITSIO_URL_cfitsio-4.0.0.tar.gz
=> Already downloaded CFITSIO_URL_cfitsio-4.0.0.tar.gz
Downloading https://bitbucket.org/aquila-consortium/libsharp2/get/1ea651d59b8463f1ddcfa3a4fbd30555c1b101af.zip for LIBSHARP_URL to LIBSHARP_URL_1ea651d59b8463f1ddcfa3a4fbd30555c1b101af.zip
=> Already downloaded LIBSHARP_URL_1ea651d59b8463f1ddcfa3a4fbd30555c1b101af.zip
Downloading https://sourceforge.net/projects/healpix/files/Healpix_3.81/healpix_cxx-3.81.1.tar.gz/download for HEALPIX_URL to HEALPIX_URL_healpix_cxx-3.81.1.tar.gz
=> Already downloaded HEALPIX_URL_healpix_cxx-3.81.1.tar.gz
Downloading https://github.com/ianlancetaylor/libbacktrace/archive/2446c66076480ce07a6bd868badcbceb3eeecc2e.tar.gz for BACKTRACE_URL to BACKTRACE_URL_2446c66076480ce07a6bd868badcbceb3eeecc2e.tar.gz
=> Already downloaded BACKTRACE_URL_2446c66076480ce07a6bd868badcbceb3eeecc2e.tar.gz
Downloading https://boostorg.jfrog.io/artifactory/main/release/1.77.0/source/boost_1_77_0.tar.bz2 for BOOST_URL to BOOST_URL_boost_1_77_0.tar.bz2
=> Already downloaded BOOST_URL_boost_1_77_0.tar.bz2
Downloading https://gitlab.com/libeigen/eigen/-/archive/3.3.7/eigen-3.3.7.tar.bz2 for EIGEN_URL to EIGEN_URL_eigen-3.3.7.tar.bz2
=> Already downloaded EIGEN_URL_eigen-3.3.7.tar.bz2
Downloading https://github.com/pybind/pybind11/archive/v2.9.0.tar.gz for PYBIND11_URL to PYBIND11_URL_v2.9.0.tar.gz
=> Already downloaded PYBIND11_URL_v2.9.0.tar.gz
Downloading https://github.com/devonmpowell/r3d/archive/b3eef85ae5dc111d0148491772e0820406cfe0ea.zip for R3D_URL to R3D_URL_b3eef85ae5dc111d0148491772e0820406cfe0ea.zip
=> Already downloaded R3D_URL_b3eef85ae5dc111d0148491772e0820406cfe0ea.zip
Downloading https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.7/src/hdf5-1.10.7.tar.gz for HDF5_URL to HDF5_URL_hdf5-1.10.7.tar.gz
=> Already downloaded HDF5_URL_hdf5-1.10.7.tar.gz
Downloading http://ftpmirror.gnu.org/gsl/gsl-2.3.tar.gz for GSL_URL to GSL_URL_gsl-2.3.tar.gz
=> Already downloaded GSL_URL_gsl-2.3.tar.gz
Downloading http://www.fftw.org/fftw-3.3.10.tar.gz for FFTW_URL to FFTW_URL_fftw-3.3.10.tar.gz
=> Already downloaded FFTW_URL_fftw-3.3.10.tar.gz
Downloading https://github.com/lesgourg/class_public/archive/refs/tags/v2.10.8.tar.gz for CLASS_CODE_URL to CLASS_CODE_URL_v2.10.8.tar.gz
=> Already downloaded CLASS_CODE_URL_v2.10.8.tar.gz
Done. You can now upload the $SRC_DIR/downloads/ directory to the remote computer in the source directory and use --use-predownload.
Ensure the current directory is ARES
-- Conda environment detected: installation default in $BUILD_PREFIX
Summary of CMAKE_FLAGS:
-DINTERNAL_HDF5:BOOL=OFF
-DCMAKE_INSTALL_PREFIX=$PREFIX
-DCMAKE_BUILD_TYPE=RelWithDebInfo
-DINTERNAL_GSL:BOOL=OFF
-DINTERNAL_BOOST:BOOL=OFF
-DPYTHON_EXECUTABLE=$PREFIX/bin/python
-DBUILD_PYTHON_EXTENSION:BOOL=ON
-DBUILD_PYTHON_EXTENSION:BOOL=ON
-DBUILD_PYTHON_EMBEDDER:BOOL=ON
-DINSTALL_PYTHON_LOCAL=OFF
-DCFITSIO_URL:URL=file://$SRC_DIR/downloads/CFITSIO_URL_cfitsio-4.0.0.tar.gz
-DLIBSHARP_URL:URL=file://$SRC_DIR/downloads/LIBSHARP_URL_1ea651d59b8463f1ddcfa3a4fbd30555c1b101af.zipIn file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/dyn/particle_distribute.hpp:20,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/dyn/particle_distribute.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:39 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:68 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:97 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:131 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:243 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:411 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:3071 (message):
The DOWNLOAD_EXTRACT_TIMESTAMP option was not given and policy CMP0135 is
not set. The policy's OLD behavior will be used. When using a URL
download, the timestamps of extracted files should preferably be that of
the time of extraction, otherwise code that depends on the extracted
contents might not be rebuilt if the URL changes. The OLD behavior
preserves the timestamps from the archive instead, but this is usually not
what you want. Update your project to the NEW behavior or specify the
DOWNLOAD_EXTRACT_TIMESTAMP option with a value of true to avoid this
robustness issue.
Call Stack (most recent call first):
/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/share/cmake-3.24/Modules/ExternalProject.cmake:4167 (_ep_add_download_command)
external/external_build.cmake:516 (ExternalProject_Add)
CMakeLists.txt:92 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
-DHEALPIX_URL:URL=file://$SRC_DIR/downloads/HEALPIX_URL_healpix_cxx-3.81.1.tar.gz
-DBACKTRACE_URL:URL=file://$SRC_DIR/downloads/BACKTRACE_URL_2446c66076480ce07a6bd868badcbceb3eeecc2e.tar.gz
-DEIGEN_URL:URL=file://$SRC_DIR/downloads/EIGEN_URL_eigen-3.3.7.tar.bz2
-DPYBIND11_URL:URL=file://$SRC_DIR/downloads/PYBIND11_URL_v2.9.0.tar.gz
-DR3D_URL:URL=file://$SRC_DIR/downloads/R3D_URL_b3eef85ae5dc111d0148491772e0820406cfe0ea.zip
-DFFTW_URL:URL=file://$SRC_DIR/downloads/FFTW_URL_fftw-3.3.10.tar.gz
-DCLASS_CODE_URL:URL=file://$SRC_DIR/downloads/CLASS_CODE_URL_v2.10.8.tar.gz
-DCONTEXT_TIMER:BOOL=OFF
-DARES_PREFIX_PATH=$PREFIX;:$PREFIX
-DCMAKE_BUILD_TYPE=Release
-DCMAKE_C_COMPILER=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang
-DCMAKE_CXX_COMPILER=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang++
-DCMAKE_INSTALL_PREFIX=$PREFIX
-- Found:$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang
-- Found:$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang++
-- Found:cmake
-- Found:autoconf
-- Found:automake
-- Found:patch
-- Found:pkg-config
-- The CXX compiler identification is Clang 14.0.4
-- The C compiler identification is Clang 14.0.4
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: $BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: $BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found OpenMP_C: -fopenmp=libomp (found version "5.0")
-- Found OpenMP_CXX: -fopenmp=libomp (found version "5.0")
-- Found OpenMP: TRUE (found version "5.0")
-- Found PkgConfig: $PREFIX/bin/pkg-config (found version "0.29.2")
-- Compiler ID is: C -> Clang, CXX -> Clang
-- Found Boost: $PREFIX/lib/cmake/Boost-1.77.0/BoostConfig.cmake (found suitable version "1.77.0", minimum required is "1.69") found components: random chrono regex system program_options timer stacktrace_basic stacktrace_addr2line missing components: stacktrace_backtrace
-- Boost version 1.77.0
-- HDF5 CXX compiler wrapper is unable to compile a minimal HDF5 program.
-- Found HDF5: $PREFIX/lib/libhdf5_cpp.dylib;$PREFIX/lib/libhdf5.dylib (found version "1.12.1") found components: CXX
-- GSL paths: $PREFIX/lib/libgsl.dylib $PREFIX/lib/libgslcblas.dylib $PREFIX/include
-- Used FFTW libraries: $SRC_DIR/build/ext_install/lib/libfftw3_omp.a;$SRC_DIR/build/ext_install/lib/libfftw3.a
-- pybind11 v2.9.0
-- Found PythonInterp: $PREFIX/bin/python (found version "3.8.13")
-- Found PythonLibs: $PREFIX/lib/libpython3.8.dylib
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
-- Performing Test HAS_FLTO_THIN
-- Performing Test HAS_FLTO_THIN - Success
-- C compiler version: 14.0.4
-- C++ compiler Version: 14.0.4
-- ARES modules found:
-- demo (do not build)
-- Registering forward model libLSS/physics/forwards/primordial.hpp
-- Registering forward model libLSS/physics/forwards/primordial_as.hpp
-- Registering forward model libLSS/physics/forwards/transfer_ehu.hpp
-- Registering forward model libLSS/physics/forwards/transfer_class.hpp
-- Registering forward model libLSS/physics/forwards/fnl.hpp
-- Registering forward model libLSS/physics/hades_pt.hpp
-- Registering forward model libLSS/physics/haar.hpp
-- Registering forward model libLSS/physics/hades_log.hpp
-- Registering forward model libLSS/physics/forwards/upgrade.hpp
-- Registering forward model libLSS/physics/forwards/transfer.hpp
-- Registering forward model libLSS/physics/forwards/borg_lpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_lpt_neutrino.hpp
-- Registering forward model libLSS/physics/forwards/borg_qlpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_qlpt_rsd.hpp
-- Registering forward model libLSS/physics/forwards/borg_2lpt.hpp
-- Registering forward model libLSS/physics/forwards/borg_multi_pm.hpp
-- Registering forward model libLSS/physics/forwards/downgrade.hpp
-- Registering forward model libLSS/physics/forwards/softplus.hpp
-- Registering forward model libLSS/physics/forwards/enforceMass.hpp
-- Registering forward model libLSS/physics/forwards/patch_model.hpp
-- Registering forward model libLSS/physics/forwards/adapt_generic_bias.hpp
-- Registering forward model libLSS/physics/forwards/altair_ap.hpp
-- Registering forward model libLSS/physics/forwards/kappa_sphere.hpp
-- Registering likelihood libLSS/samplers/hades/hades_linear_likelihood.hpp
-- Registering likelihood libLSS/samplers/lensing/hades_lensing_likelihood.hpp
-- Registering likelihood libLSS/samplers/reduced_shear/hades_reduced_shear_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_poisson_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_null_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_oct_likelihood.hpp
-- Registering likelihood libLSS/samplers/borg/borg_oct_likelihood_marg.hpp
-- Registering likelihood libLSS/samplers/borg/borg_studentT_likelihood.hpp
-- Registering likelihood libLSS/samplers/generic/generic_registry.hpp
-- ARES deps are : cfitsio;healpix;backtrace;eigen;fftw;cosmotool;class_code
-- Meta deps : test_console test_has_member test_proj test_messenger test_messenger2 test_messenger3 test_schechter test_rgen test_window3d test_slice_sweep test_slice_sweep_double test_cic test_mngp test_uninit test_fused_array test_supersampling test_gradient_supersampling test_array test_auto_interpolator test_gig test_fuse_wrapper test_tuple test_fused_cond test_cic_adjoint test_cg test_cpu_feature test_r3d test_hdf5_buffered test_overload test_class_interface test_domains test_mpi_types test_markov_state test_multi_chain test_part_swapper test_aux_attributes test_generic_likelihood_base test_generic_likelihood_s_field test_generic_likelihood_bias test_ghost_planes test_many_power test_fmin test_robust_poisson test_generic_likelihood_foreground test_power_law_1 test_power_law_0 test_patch_model test_broken_power_law test_forward_velocity test_spherical_projection test_oct_likelihood test_symplectic test_modelio test_hermiticity test_ghost_array test_representation test_hmclet test_dense_mass test_lensing_minimal test_voxel_poisson test_member_check test_tiled_array
-- INCLUDE_PATH=$SRC_DIR/build;$SRC_DIR/build/_deps/r3d-src
-- Docfiles=
-- System python site: $PREFIX/lib/python3.8/site-packages
-- User python site: /Users/jenkins-x86/.local/lib/python3.8/site-packages
-- Python install location: $PREFIX/lib/python3.8/site-packages
-- HADES did not find JULIA
-- Julia missing, Hades_Julia disabled
-- Activate Hades_python
-- Configuring done
-- Generating done
-- Build files have been written to: $SRC_DIR/build
------------------------------------------------------------------
Configuration done.
Move to $SRC_DIR/build/ and type 'make' now.
Please check the configuration of your MPI C compiler. You may need
to set an environment variable to use the proper compiler.
Some example (for SH/BASH shells):
- OpenMPI:
OMPI_CC=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang
OMPI_CXX=$BUILD_PREFIX/bin/x86_64-apple-darwin13.4.0-clang++
export OMPI_CC OMPI_CXX
------------------------------------------------------------------
[ 0%] Creating directories for 'class_code'
[ 0%] Performing download step (verify and extract) for 'class_code'
-- verifying file...
file='$SRC_DIR/downloads/CLASS_CODE_URL_v2.10.8.tar.gz'
-- verifying file... done
-- extracting...
PLEASE submit a bug report to https://github.com/llvm/llvm-project/issues/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/bin/x86_64-apple-darwin13.4.0-clang -fopenmp=libomp -D__CLASSDIR__=\"/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work/build/external_build/class-code-prefix/src/class_code\" -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold/include -fdebug-prefix-map=/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work=/usr/local/src/conda/aquila_borg-3.0.1.13 -fdebug-prefix-map=/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold=/usr/local/src/conda-prefix -I../include -I../external/RecfastCLASS -I../external/heating -I../external/HyRec2020 -c ../tools/sparse.c -o sparse.o
1. <eof> parser at end of file
2. Code generation
Stack dump without symbol names (ensure you have llvm-symbolizer in your PATH or set the environment var `LLVM_SYMBOLIZER_PATH` to point to it):
0 libLLVM-14.dylib 0x000000011ec79948 llvm::sys::PrintStackTrace(llvm::raw_ostream&, int) + 56
1 libLLVM-14.dylib 0x000000011ec787c8 llvm::sys::RunSignalHandlers() + 248
2 libLLVM-14.dylib 0x000000011ec78e60 llvm::sys::CleanupOnSignal(unsigned long) + 256
3 libLLVM-14.dylib 0x000000011eb89c90 CrashRecoverySignalHandler(int) + 208
4 libsystem_platform.dylib 0x00007ff81a89adfd _sigtramp + 29
5 libsystem_platform.dylib 0x00007fd0e9a05f60 _sigtramp + 18446743905385230720
6 libsystem_malloc.dylib 0x00007ff81a6aa7d5 nanov2_madvise_block + 141
7 libsystem_malloc.dylib 0x00007ff81a6a4149 free_small + 912
8 libsystem_malloc.dylib 0x0000000000000200 free_small + 18446603370137764935
9 libLLVM-14.dylib 0x000000012030d348 llvm::MCContext::reset() + 2600
10 libLLVM-14.dylib 0x000000011f0802a8 llvm::MachineModuleInfoWrapperPass::doFinalization(llvm::Module&) + 72
11 libLLVM-14.dylib 0x000000011eddd310 llvm::legacy::PassManagerImpl::run(llvm::Module&) + 4400
12 libclang-cpp.14.dylib 0x0000000111152ff6 clang::EmitBackendOutput(clang::DiagnosticsEngine&, clang::HeaderSearchOptions const&, clang::CodeGenOptions const&, clang::TargetOptions const&, clang::LangOptions const&, llvm::StringRef, llvm::Module*, clang::BackendAction, std::__1::unique_ptr<llvm::raw_pwrite_stream, std::__1::default_delete<llvm::raw_pwrite_stream> >) + 5718
13 libclang-cpp.14.dylib 0x000000011148152c clang::BackendConsumer::HandleTranslationUnit(clang::ASTContext&) + 1772
14 libclang-cpp.14.dylib 0x00000001101a1c34 clang::ParseAST(clang::Sema&, bool, bool) + 580
15 libclang-cpp.14.dylib 0x0000000111e11638 clang::FrontendAction::Execute() + 104
16 libclang-cpp.14.dylib 0x0000000111d74076 clang::CompilerInstance::ExecuteAction(clang::FrontendAction&) + 854
17 libclang-cpp.14.dylib 0x0000000111e8758f clang::ExecuteCompilerInvocation(clang::CompilerInstance*) + 879
18 clang-14 0x00000001040f21cf cc1_main(llvm::ArrayRef<char const*>, char const*, void*) + 2063
19 clang-14 0x00000001040f02c8 ExecuteCC1Tool(llvm::SmallVectorImpl<char const*>&) + 280
20 libclang-cpp.14.dylib 0x00000001119e0f67 void llvm::function_ref<void ()>::callback_fn<clang::driver::CC1Command::Execute(llvm::ArrayRef<llvm::Optional<llvm::StringRef> >, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >*, bool*) const::$_1>(long) + 23
21 libLLVM-14.dylib 0x000000011eb899b2 llvm::CrashRecoveryContext::RunSafely(llvm::function_ref<void ()>) + 226
22 libclang-cpp.14.dylib 0x00000001119e0ac6 clang::driver::CC1Command::Execute(llvm::ArrayRef<llvm::Optional<llvm::StringRef> >, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >*, bool*) const + 390
23 libclang-cpp.14.dylib 0x00000001119aa2fe clang::driver::Compilation::ExecuteCommand(clang::driver::Command const&, clang::driver::Command const*&) const + 750
24 libclang-cpp.14.dylib 0x00000001119aa6ec clang::driver::Compilation::ExecuteJobs(clang::driver::JobList const&, llvm::SmallVectorImpl<std::__1::pair<int, clang::driver::Command const*> >&) const + 140
25 libclang-cpp.14.dylib 0x00000001119c44cc clang::driver::Driver::ExecuteCompilation(clang::driver::Compilation&, llvm::SmallVectorImpl<std::__1::pair<int, clang::driver::Command const*> >&) + 428
26 clang-14 0x00000001040efc91 main + 10689
27 dyld 0x000000020416a52e start + 462
28 dyld 0x0000000000000003 start + 18446744065051024547
clang-14: error: clang frontend command failed with exit code 139 (use -v to see invocation)
clang version 14.0.4
Target: x86_64-apple-darwin13.4.0
Thread model: posix
InstalledDir: /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/_build_env/bin
clang-14: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
clang-14: note: diagnostic msg: /var/folders/4d/l5p4jwcd6j35zzcl03nbxj_40000gr/T/sparse-99d4ce.c
clang-14: note: diagnostic msg: /var/folders/4d/l5p4jwcd6j35zzcl03nbxj_40000gr/T/sparse-99d4ce.sh
clang-14: note: diagnostic msg: Crash backtrace is located in
clang-14: note: diagnostic msg: /Users/jenkins-x86/Library/Logs/DiagnosticReports/clang-14_<YYYY-MM-DD-HHMMSS>_<hostname>.crash
clang-14: note: diagnostic msg: (choose the .crash file that corresponds to your crash)
clang-14: note: diagnostic msg:
********************
make[4]: *** [sparse.o] Error 139
make[3]: *** [external_build/class-code-prefix/src/class_code-stamp/class_code-build] Error 2
make[2]: *** [CMakeFiles/class_code.dir/all] Error 2
make[1]: *** [python/CMakeFiles/python-install.dir/rule] Error 2
make: *** [python-install] Error 2
src='$SRC_DIR/downloads/CLASS_CODE_URL_v2.10.8.tar.gz'
dst='$SRC_DIR/build/external_build/class-code-prefix/src/class_code'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
[ 2%] No update step for 'class_code'
[ 2%] Performing patch step for 'class_code'
patching file source/thermodynamics.c
[ 2%] Performing configure step for 'class_code'
No configure
[ 5%] Performing build step for 'class_code'
Traceback (most recent call last):
File "/Users/jenkins-x86/miniconda3/envs/builder/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/cli/main_build.py", line 488, in main
execute(sys.argv[1:])
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/cli/main_build.py", line 477, in execute
outputs = api.build(args.recipe, post=args.post, test_run_post=args.test_run_post,
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/api.py", line 186, in build
return build_tree(
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/build.py", line 3088, in build_tree
packages_from_this = build(metadata, stats,
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/build.py", line 2211, in build
utils.check_call_env(cmd, env=env, rewrite_stdout_env=rewrite_env,
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/utils.py", line 411, in check_call_env
return _func_defaulting_env_to_os_environ('call', *popenargs, **kwargs)
File "/Users/jenkins-x86/miniconda3/envs/builder/lib/python3.10/site-packages/conda_build/utils.py", line 391, in _func_defaulting_env_to_os_environ
raise subprocess.CalledProcessError(proc.returncode, _args)
subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/Users/jenkins-x86/miniconda3/envs/builder/conda-bld/aquila_borg_1660667960156/work/conda_build.sh']' returned non-zero exit status 2.
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 25326 killed;
[ssh-agent] Stopped.
[Pipeline] // sshagent
[Pipeline] }
[Pipeline] // ansiColor
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch MacOS
Sending interrupt signal to process
x86_64-conda-linux-gnu-c++: fatal error: Terminated signal terminated program cc1plus
compilation terminated.
make[3]: *** [libLSS/CMakeFiles/LSS.dir/build.make:1266: libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_sic.cpp.o] Error 1
make[3]: *** Deleting file 'libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_sic.cpp.o'
make[2]: *** [CMakeFiles/Makefile2:1630: libLSS/CMakeFiles/LSS.dir/all] Error 2
make[1]: *** [CMakeFiles/Makefile2:6404: python/CMakeFiles/python-install.dir/rule] Error 2
make: *** [Makefile:2701: python-install] Error 2
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/hades_pt.cpp.o
[ 55%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/hades_log.cpp.o
[ 55%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/upgrade.cpp.o
[ 55%] Building CXX object libLSS/CMakeFiles/LSS.dir/tools/hermiticity_fixup.cpp.o
[ 55%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/general_model_io.cpp.o
[ 55%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/tiled_array.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/bias/biases.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/projector_lensing.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_lpt.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_lpt_neutrino.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_qlpt.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_qlpt_rsd.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_multi_pm.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_2lpt.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/softplus.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/enforceMass.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/downgrade.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/patch_model.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/adapt_generic_bias.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/altair_ap.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/kappa_sphere.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/particle_balancer/dyn/particle_distribute.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_linear.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_cic.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_sic.cpp.o
Traceback (most recent call last):
File "/build/jenkins/miniconda3/envs/builder/bin/conda-build", line 11, in <module>
sys.exit(main())
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/cli/main_build.py", line 488, in main
execute(sys.argv[1:])
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/cli/main_build.py", line 477, in execute
outputs = api.build(args.recipe, post=args.post, test_run_post=args.test_run_post,
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/api.py", line 186, in build
return build_tree(
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/build.py", line 3088, in build_tree
packages_from_this = build(metadata, stats,
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/build.py", line 2211, in build
utils.check_call_env(cmd, env=env, rewrite_stdout_env=rewrite_env,
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/utils.py", line 411, in check_call_env
return _func_defaulting_env_to_os_environ('call', *popenargs, **kwargs)
File "/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/utils.py", line 391, in _func_defaulting_env_to_os_environ
raise subprocess.CalledProcessError(proc.returncode, _args)
subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660666962422/work/conda_build.sh']' returned non-zero exit status 2.
Terminated
script returned exit code 143
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 1567889 killed;
[ssh-agent] Stopped.
[Pipeline] // sshagent
[Pipeline] }
[Pipeline] // ansiColor
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
Failed in branch Build linux
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy Linux)
Stage "Conda deploy Linux" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy MacOS-M1)
Stage "Conda deploy MacOS-M1" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy MacOS-x86)
Stage "Conda deploy MacOS-x86" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] emailext
Warning: guilhem.lavaux@iap.fr is not a recognized user, but sending mail anyway
Sending email to: guilhem.lavaux@iap.fr webaquila@iap.fr
[Pipeline] node
Running on macos-m1 in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] dir
Running in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0/jenkins-borg_conda-release%2F3.0-38
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] dir
Running in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0@tmp
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withCredentials
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE
![[Jenkins]](/jenkins/static/1704ec6c/images/svgs/logo.svg){kind=logo}
