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[ 66%] Building CXX object sample/CMakeFiles/testReadFlash.dir/testReadFlash.cpp.o
[ 68%] Linking CXX executable testReadFlash
[ 68%] Built target testReadFlash
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:30,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/healpix.hpp:43,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/sample/test_healpix_calls.cpp:37:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/healpix.hpp:46:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/base_types.hpp:163:8: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
163 | throw(std::bad_cast) = 0;
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/healpix.hpp:53:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/details/healpix_map.hpp:67:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
67 | throw(std::bad_cast)
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/healpix.hpp:54:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/details/healpix_alms.hpp:92:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
92 | throw(std::bad_cast)
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/healpix.hpp:56:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/details/healpix_spectrum.hpp: In instantiation of 'void CosmoTool::HealpixSpectrum<T>::sqrt() [with T = double]':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/details/healpix_spectrum.hpp:77:10: required from here
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/fourier/details/healpix_spectrum.hpp:78:76: warning: 'std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = double; _Result = double]' is deprecated: use 'std::function' instead [-Wdeprecated-declarations]
78 | std::transform(cls.begin(), cls.end(), cls.begin(), std::ptr_fun<T,T>(std::sqrt));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/string:48,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/bits/locale_classes.h:40,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/bits/ios_base.h:41,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/ios:42,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/ostream:38,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/iostream:39,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/sample/test_healpix_calls.cpp:36:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/include/c++/12.1.0/bits/stl_function.h:1126:5: note: declared here
1126 | ptr_fun(_Result (*__x)(_Arg))
| ^~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/yield_k.hpp:23,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock.hpp:42,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/shared_ptr.hpp:29,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/shared_ptr.hpp:17,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/sphSmooth.hpp:38,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/sample/simple3DFilter.cpp:6:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/yield_k.hpp:23,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock.hpp:42,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/smart_ptr/shared_ptr.hpp:29,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/shared_ptr.hpp:17,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/src/sphSmooth.hpp:38,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/external/cosmotool/sample/simpleDistanceFilter.cpp:5:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object sample/CMakeFiles/testEskow.dir/testEskow.cpp.o
[ 71%] Linking CXX executable testEskow
[ 71%] Built target testEskow
[ 72%] Building CXX object sample/CMakeFiles/testAlgo.dir/testAlgo.cpp.o
[ 73%] Linking CXX executable testAlgo
[ 73%] Built target testAlgo
[ 75%] Building CXX object sample/CMakeFiles/testBSP.dir/testBSP.cpp.o
[ 76%] Linking CXX executable testBSP
[ 76%] Built target testBSP
[ 78%] Building CXX object sample/CMakeFiles/test_healpix_calls.dir/test_healpix_calls.cpp.o
[ 79%] Linking CXX executable test_healpix_calls
[ 79%] Built target test_healpix_calls
[ 81%] Building CXX object sample/CMakeFiles/test_cosmopower.dir/test_cosmopower.cpp.o
[ 82%] Linking CXX executable test_cosmopower
[ 82%] Built target test_cosmopower
[ 84%] Building CXX object sample/CMakeFiles/simple3DFilter.dir/simple3DFilter.cpp.o
[ 85%] Linking CXX executable simple3DFilter
[ 85%] Built target simple3DFilter
[ 86%] Building CXX object sample/CMakeFiles/simpleDistanceFilter.dir/simpleDistanceFilter.cpp.o
[ 88%] Linking CXX executable simpleDistanceFilter
[ 88%] Built target simpleDistanceFilter
[ 89%] Building CXX object sample/CMakeFiles/gadgetToArray.dir/gadgetToArray.cpp.o
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Install the project...
-- Install configuration: ""
-- Installing: $SRC_DIR/build/ext_install/lib/libCosmoTool.a
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/.
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./interpolate.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./powerSpectrum.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadFlash.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./kdtree_leaf.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./field.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./interpolate3d.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./symbol_visible.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bqueue.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./cic.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./yorick.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fixArray.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./kdtree_splitters.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./mykdtree.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/healpix.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/euclidian.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft/fftw_calls_mpi.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft/fftw_calls.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft/fftw_complex.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/base_types.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/healpix_spectrum.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/euclidian_transform.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/euclidian_maps.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/euclidian_spectrum_1d_bin.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/euclidian_spectrum_1d.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/healpix_transform.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/healpix_map.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/healpix_utility.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details/healpix_alms.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./miniargs.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadSimu.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./numpy_adaptors.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sphSmooth.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./algo.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./h5_readFlash.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./pool.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bsp_simple.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./growthFactor.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./special_math.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./replicateGenerator.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sparseGrid.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./cosmopower.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./octTree.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./fortran.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./hdf5_array.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./load_data.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./mach.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./config.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadGadget.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./eskow.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./loadRamses.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./tf_fit.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./dinterpolate.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./newton.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./openmp.hpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions_ser.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/numeric
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/Example.cpp
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_tools.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions_par.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_extensions.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/algorithm
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_numeric_ser.h
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/License.txt
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/omptl/omptl_algorithm_ser.h
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/.
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/fft
-- Up-to-date: $SRC_DIR/build/ext_install/include/CosmoTool/./fourier/details
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./octTree.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sphSmooth.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bqueue.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./dinterpolate.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./bsp_simple.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./mykdtree.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./kdtree_leaf.tcc
-- Installing: $SRC_DIR/build/ext_install/include/CosmoTool/./sparseGrid.tcc
-- Installing: $SRC_DIR/build/ext_install/bin/simple3DFilter
-- Installing: $SRC_DIR/build/ext_install/bin/simpleDistanceFilter
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[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/ares/negative_foreground_sampler.cpp.o
[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/main_loop.cpp.o
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[ 40%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/gig_sampler.cc.o
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[ 42%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/registry.cpp.o
[ 42%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/simpleLikelihood.cpp.o
[ 42%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/core/generate_random_field.cpp.o
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[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/model_io.cpp.o
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[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/data_representation.cpp.o
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[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/tiledarray_representation.cpp.o
[ 47%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/data/modelio_representation.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/primordial.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/primordial_as.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/fnl.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer_ehu.cpp.o
[ 50%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer_class.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/registry.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/chain_forward_model.cpp.o
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/branch.cpp.o
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In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.cpp:23:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt_neutrino.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt_neutrino.cpp:22:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_qlpt.hpp:24,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_qlpt.cpp:26:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_qlpt_rsd.hpp:24,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_qlpt_rsd.cpp:26:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_multi_pm.hpp:19,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_multi_pm.cpp:14:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_2lpt.hpp:25,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_2lpt.cpp:25:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/patch_model.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/dyn/particle_distribute.hpp:20,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/dyn/particle_distribute.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:30,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/samplers/lya/hades_lya_likelihood.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:30,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/samplers/lya_rsd_qlpt/hades_lya_likelihood_rsd.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:30,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/samplers/lensing/base_likelihood_lensing.cpp:12:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/build/libLSS/physics/forwards/all_models.hpp:12,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/bind_models.cpp:11:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/python/pyforward_borg.cpp:30:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/borg_lpt.hpp:26,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/build/libLSS/physics/forwards/all_models.hpp:12,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/python/pyforward_all.cpp:15:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
[ 52%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/hades_pt.cpp.o
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[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_lpt.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_lpt_neutrino.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_qlpt.cpp.o
[ 57%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_qlpt_rsd.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_multi_pm.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/borg_2lpt.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/transfer.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/softplus.cpp.o
[ 60%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/enforceMass.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/downgrade.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/patch_model.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/adapt_generic_bias.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/altair_ap.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/kappa_sphere.cpp.o
[ 62%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/forwards/particle_balancer/dyn/particle_distribute.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/velocity/velocity_linear.cpp.o
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[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/dm_sheet/dm_sheet.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/io/gadget3.cpp.o
[ 65%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/likelihoods/info.cpp.o
[ 67%] Building CXX object libLSS/CMakeFiles/LSS.dir/physics/likelihoods/robust_poisson.cpp.o
[ 67%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/rgen/frozen/frozen_phase_density_sampler.cpp.o
[ 67%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/model_params.cpp.o
[ 67%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/bias_model_params.cpp.o
[ 67%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/run_forward.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_generic.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_gaussian.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_poisson.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_poisson_2.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_robust.cpp.o
[ 70%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/impl_robust_2.cpp.o
[ 72%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/generic_sigma8.cpp.o
[ 72%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/generic_registry.cpp.o
[ 72%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/generic/generic_sigma8_second.cpp.o
[ 72%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/rgen/qnhmc/qnhmc_density_sampler.cpp.o
[ 72%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/borg/borg_oct_likelihood.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/borg/borg_studentT_likelihood.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/borg/borg_oct_likelihood_marg.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lya/base_lya_likelihood.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lya/hades_lya_likelihood.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lya_rsd_qlpt/hades_lya_likelihood_rsd.cpp.o
[ 75%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/altair/altair_meta_sampler.cpp.o
[ 77%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lensing/base_likelihood_lensing.cpp.o
[ 77%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lensing/hades_lensing_likelihood.cpp.o
[ 77%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/lensing/hades_lensing_meta.cpp.o
[ 77%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/reduced_shear/hades_reduced_shear_likelihood.cpp.o
[ 77%] Building CXX object libLSS/CMakeFiles/LSS.dir/samplers/reduced_shear/hades_reduced_shear_meta.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/hmclet.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/hmclet_qnhmc.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/diagonal_mass.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/mass_burnin.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/dense_mass.cpp.o
[ 80%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/julia_slice.cpp.o
[ 82%] Building CXX object libLSS/CMakeFiles/LSS.dir/hmclet/julia_hmclet.cpp.o
[ 82%] Building CXX object libLSS/CMakeFiles/LSS.dir/bind_models.cpp.o
[ 82%] Building CXX object libLSS/CMakeFiles/LSS.dir/mpi/fake_mpi/mpi_communication.cpp.o
[ 82%] Building C object libLSS/CMakeFiles/LSS.dir/__/_deps/r3d-src/r3d.c.o
[ 82%] Linking CXX static library libLSS.a
[ 82%] Built target LSS
[ 82%] Generating pyborg_doc/borg_base.hpp
[ 82%] Generating pyborg_doc/aquila_borg.cosmo.hpp
[ 82%] Generating pyborg_doc/aquila_borg.domains.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.BORGForwardModel.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.BaseForwardModel.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.BoxModel.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.ChainForwardModel.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.ForwardModel.hpp
[ 85%] Generating pyborg_doc/aquila_borg.forward.hpp
[ 87%] Generating pyborg_doc/aquila_borg.forward.models.hpp
[ 87%] Generating pyborg_doc/aquila_borg.forward.velocity.VelocityBase.hpp
[ 87%] Generating pyborg_doc/aquila_borg.forward.velocity.hpp
[ 87%] Generating pyborg_doc/aquila_borg.likelihood.hpp
[ 87%] Generating pyborg_doc/aquila_borg.modelio.hpp
[ 90%] Generating pyborg_doc/aquila_borg.samplers.hpp
[ 90%] Generating pyborg_doc/borg_base.Console.hpp
[ 90%] Building CXX object python/CMakeFiles/python_borg.dir/base.cpp.o
[ 90%] Building CXX object python/CMakeFiles/python_borg.dir/pycosmo.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pyforward.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pyforward_v3.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pyforward_borg.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pyforward_borg_2.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pybias.cpp.o
[ 92%] Building CXX object python/CMakeFiles/python_borg.dir/pyforward_all.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/bind.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/pyvelocity.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/pylikelihood.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/pysamplers.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/any_wrapper.cpp.o
[ 95%] Building CXX object python/CMakeFiles/python_borg.dir/pydomains.cpp.o
[ 97%] Building CXX object python/CMakeFiles/python_borg.dir/pymodelio.cpp.o
[ 97%] Building CXX object python/CMakeFiles/python_borg.dir/pyfilters.cpp.o
[ 97%] Linking CXX static library libpython_borg.a
In file included from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/particle_distribute.hpp:21,
from /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/tools/borg_forward/borg_forward.cpp:55:
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp: In member function 'void LibLSS::ParticleSwapper<ArrayRef, AuxiliaryAttributes>::copy_in_attr(size_t, const ArrayRecv&, size_t)':
/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work/libLSS/physics/forwards/particle_balancer/part_swapper.hpp:307:13: warning: expected 'template' keyword before dependent template name [-Wmissing-template-keyword]
307 | attrs.store<id>(target_idx, loc_in_attr);
| ^~~~~
/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_MPI' is being passed through with value 'nompi'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_PREDOWNLOAD' is being passed through with value '/build/jenkins/borg_downloads'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
[ 97%] Built target python_borg
[ 97%] Building CXX object python/CMakeFiles/_borg.dir/_borg.cpp.o
[100%] Linking CXX shared module _borg.cpython-37m-x86_64-linux-gnu.so
[100%] Built target _borg
-- Install configuration: "Release"
-- Installing: $PREFIX/share/aquila_borg//class
-- Installing: $PREFIX/share/aquila_borg//class/bbn
-- Installing: $PREFIX/share/aquila_borg//class/bbn/sBBN_2017.dat
-- Installing: $PREFIX/share/aquila_borg//class/bbn/sBBN.dat
-- Installing: $PREFIX/share/aquila_borg//class/bbn/sBBN_2017_marcucci.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/output_xe.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/input.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/two_photon_tables.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/two_photon_tables_hires.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/Alpha_inf.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/R_inf.dat
-- Installing: $PREFIX/share/aquila_borg//class/hyrec/fit_swift.dat
[100%] Built target data-install
-- Install configuration: "Release"
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so
-- Installing: $PREFIX/lib/python3.7/site-packages/borg
-- Installing: $PREFIX/lib/python3.7/site-packages/borg/__init__.py
-- Up-to-date: $PREFIX/lib/python3.7/site-packages/aquila_borg
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/dask_support
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/dask_support/__init__.py
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/borg_native.py
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/dft.py
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/__init__.py
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/utils.py
-- Installing: $PREFIX/lib/python3.7/site-packages/aquila_borg/dask.py
[100%] Built target python-install
[ 4%] Built target class_code
[ 7%] Built target cfitsio
[ 9%] Built target libsharp
[ 14%] Built target healpix
[ 17%] Built target backtrace
[ 19%] Built target eigen
[ 24%] Built target fftw
[ 26%] Built target cosmotool
Consolidate compiler generated dependencies of target LSS
[ 80%] Built target LSS
[ 80%] Building CXX object tools/borg_help/CMakeFiles/borg_help.dir/borg_help.cpp.o
[ 80%] Linking CXX executable borg_help
[ 80%] Built target borg_help
-- Install configuration: "Release"
-- Up-to-date: $PREFIX/share/aquila_borg//class
-- Up-to-date: $PREFIX/share/aquila_borg//class/bbn
-- Up-to-date: $PREFIX/share/aquila_borg//class/bbn/sBBN_2017.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/bbn/sBBN.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/bbn/sBBN_2017_marcucci.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/output_xe.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/input.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/two_photon_tables.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/two_photon_tables_hires.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/Alpha_inf.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/R_inf.dat
-- Up-to-date: $PREFIX/share/aquila_borg//class/hyrec/fit_swift.dat
[ 80%] Built target data-install
[ 80%] Building CXX object tools/ares/CMakeFiles/ares3.dir/ares3.cpp.o
[ 80%] Linking CXX executable ares3
[ 80%] Built target ares3
[ 80%] Building CXX object tools/hades/CMakeFiles/hades.dir/likelihood_info.cpp.o
[ 80%] Linking CXX static library libhades.a
[ 80%] Built target hades
[ 80%] Building CXX object tools/hades/CMakeFiles/hades3.dir/hades3.cpp.o
[ 82%] Building CXX object tools/hades/CMakeFiles/hades3.dir/hades_bundle_init.cpp.o
[ 82%] Linking CXX executable hades3
[ 82%] Built target hades3
Consolidate compiler generated dependencies of target python_borg
[ 97%] Built target python_borg
[ 97%] Building CXX object tools/hades_python/CMakeFiles/hades_python.dir/hades_python.cpp.o
[ 97%] Building CXX object tools/hades_python/CMakeFiles/hades_python.dir/python_bundle_init.cpp.o
[ 97%] Building CXX object tools/hades_python/CMakeFiles/hades_python.dir/python_mock_gen.cpp.o
[ 97%] Linking CXX executable hades_python
[ 97%] Built target hades_python
[ 97%] Building CXX object tools/borg2gadget3/CMakeFiles/borg2gadget3.dir/borg2gadget3.cpp.o
[ 97%] Linking CXX executable borg2gadget3
[ 97%] Built target borg2gadget3
[100%] Building CXX object tools/borg_forward/CMakeFiles/borg_forward.dir/borg_forward.cpp.o
[100%] Building CXX object tools/borg_forward/CMakeFiles/borg_forward.dir/bias_generator.cpp.o
[100%] Linking CXX executable borg_forward
[100%] Built target borg_forward
-- Install configuration: "Release"
-- Installing: $PREFIX/bin/ares3
-- Installing: $PREFIX/bin/hades3
-- Installing: $PREFIX/bin/hades_python
-- Installing: $PREFIX/bin/borg2gadget3
-- Installing: $PREFIX/bin/borg_forward
-- Installing: $PREFIX/bin/borg_help
[100%] Built target tools-install
Resource usage statistics from building aquila_borg:
Process count: 23
CPU time: Sys=0:01:08.1, User=0:22:42.5
Memory: 2.2G
Disk usage: 927.0K
Time elapsed: 0:30:21.2
compiling .pyc files...
number of files: 31
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Warning: rpath /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/lib is outside prefix /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla (removing it)
Unknown format
Unknown format
Unknown format
Unknown format
WARNING :: Failed to get_static_lib_exports(/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/libpython3.7m.a)
WARNING :: Failed to get_static_lib_exports(/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/libpython3.7m.nolto.a)
WARNING :: Failed to get_static_lib_exports(/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/python3.7/site-packages/numpy/core/lib/libnpymath.a)
WARNING :: Failed to get_static_lib_exports(/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/python3.7/site-packages/numpy/random/lib/libnpyrandom.a)
INFO: sysroot: '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/sysroot/' files: '['/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/sysroot/usr/share/zoneinfo/zone.tab', '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/sysroot/usr/share/zoneinfo/tzdata.zi', '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/sysroot/usr/share/zoneinfo/right/Zulu', '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_build_env/x86_64-conda-linux-gnu/sysroot/usr/share/zoneinfo/right/WET']'
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libboost_program_options.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,bin/borg_forward): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,bin/borg_forward): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libz.so.1 found in conda-forge::libzlib-1.2.12-h166bdaf_2
INFO (aquila_borg,bin/borg_forward): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/borg_forward): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/borg_forward): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/borg_forward): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_forward): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_forward): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades3): Needed DSO lib/libboost_random.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/hades3): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/hades3): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/hades3): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,bin/hades3): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,bin/hades3): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,bin/hades3): Needed DSO lib/libz.so.1 found in conda-forge::libzlib-1.2.12-h166bdaf_2
INFO (aquila_borg,bin/hades3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades3): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/hades3): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/hades3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades3): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/hades3): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/hades3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/ares3): Needed DSO lib/libboost_random.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/ares3): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/ares3): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/ares3): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,bin/ares3): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,bin/ares3): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,bin/ares3): Needed DSO lib/libz.so.1 found in conda-forge::libzlib-1.2.12-h166bdaf_2
INFO (aquila_borg,bin/ares3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/ares3): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/ares3): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/ares3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/ares3): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/ares3): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/ares3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/ares3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/ares3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libboost_random.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,bin/hades_python): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,bin/hades_python): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libz.so.1 found in conda-forge::libzlib-1.2.12-h166bdaf_2
INFO (aquila_borg,bin/hades_python): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libpython3.7m.so.1.0 found in conda-forge::python-3.7.12-hf930737_100_cpython
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/hades_python): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/hades_python): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/hades_python): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades_python): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/hades_python): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libboost_program_options.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg2gadget3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/borg2gadget3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/borg2gadget3): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/borg2gadget3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg2gadget3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg2gadget3): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libboost_program_options.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libhdf5_cpp.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libhdf5.so.200 found in conda-forge::hdf5-1.12.1-nompi_h4df4325_104
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libgsl.so.25 found in conda-forge::gsl-2.7-he838d99_0
WARNING (aquila_borg,bin/borg_help): Needed DSO lib/libopenblas.so.0 found in ['libopenblas']
WARNING (aquila_borg,bin/borg_help): .. but ['libopenblas'] not in reqs/run, (i.e. it is overlinking) (likely) or a missing dependency (less likely)
INFO (aquila_borg,bin/borg_help): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libdl.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libboost_chrono.so.1.77.0 found in conda-forge::boost-cpp-1.77.0-he72f1d9_2
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libstdc++.so.6 found in conda-forge::libstdcxx-ng-12.1.0-ha89aaad_16
INFO (aquila_borg,bin/borg_help): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libm.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libgomp.so.1 found in conda-forge::_openmp_mutex-4.5-2_gnu
INFO (aquila_borg,bin/borg_help): Needed DSO lib/libgcc_s.so.1 found in conda-forge::libgcc-ng-12.1.0-h8d9b700_16
INFO (aquila_borg,bin/borg_help): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libpthread.so.0 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_help): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/libc.so.6 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
INFO (aquila_borg,bin/borg_help): Needed DSO x86_64-conda-linux-gnu/sysroot/lib64/ld-linux-x86-64.so.2 found in CDT/compiler package conda-forge::sysroot_linux-64-2.12-he073ed8_15
WARNING (aquila_borg): run-exports library package conda-forge::numpy-1.19.5-py37h3e96413_3 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::pyfftw-0.13.0-py37h28580d9_2 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::healpy-1.16.1-py37hc950561_0 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::cffi-1.15.1-py37h43b0acd_0 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
WARNING (aquila_borg): plugin library (Python) package conda-forge::h5py-3.7.0-nompi_py37hc97082c_100 in requirements/run but it is not used (i.e. it is overdepending or perhaps statically linked? If that is what you want then add it to `build/ignore_run_exports`)
Fixing permissions
INFO :: Time taken to mark (prefix)
0 replacements in 0 files was 0.15 seconds
Files containing CONDA_PREFIX
-----------------------------
bin/ares3 (binary): Patching
bin/borg2gadget3 (binary): Patching
bin/borg_forward (binary): Patching
bin/borg_help (binary): Patching
bin/hades3 (binary): Patching
bin/hades_python (binary): Patching
lib/python3.7/site-packages/aquila_borg/_borg.cpython-37m-x86_64-linux-gnu.so (binary): Patching
TEST START: /build/jenkins/miniconda3/envs/builder/conda-bld/linux-64/aquila_borg-3.0.1.13-nompi_py37h4f1f353_100.tar.bz2
Renaming work directory '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work' to '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64'
INFO:conda_build.utils:Renaming work directory '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work' to '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64'
shutil.move(work)=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work, dest=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64)
INFO:conda_build.utils:shutil.move(work)=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work, dest=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64)
/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_MPI' is being passed through with value 'nompi'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
/build/jenkins/miniconda3/envs/builder/lib/python3.9/site-packages/conda_build/environ.py:444: UserWarning: The environment variable 'BORG_PREDOWNLOAD' is being passed through with value '/build/jenkins/borg_downloads'. If you are splitting build and test phases with --no-test, please ensure that this value is also set similarly at test time.
warnings.warn(
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehol
The following NEW packages will be INSTALLED:
_libgcc_mutex: 0.1-conda_forge conda-forge
_openmp_mutex: 4.5-2_gnu conda-forge
aquila_borg: 3.0.1.13-nompi_py37h4f1f353_100 local
astropy: 4.3.1-py37hb1e94ed_2 conda-forge
attrs: 22.1.0-pyh71513ae_1 conda-forge
boost-cpp: 1.77.0-he72f1d9_2 conda-forge
brotli: 1.0.9-h166bdaf_7 conda-forge
brotli-bin: 1.0.9-h166bdaf_7 conda-forge
bzip2: 1.0.8-h7f98852_4 conda-forge
c-ares: 1.18.1-h7f98852_0 conda-forge
ca-certificates: 2022.6.15-ha878542_0 conda-forge
cached-property: 1.5.2-hd8ed1ab_1 conda-forge
cached_property: 1.5.2-pyha770c72_1 conda-forge
certifi: 2022.6.15-py37h89c1867_0 conda-forge
cffi: 1.15.1-py37h43b0acd_0 conda-forge
cfitsio: 4.1.0-hd9d235c_0 conda-forge
cycler: 0.11.0-pyhd8ed1ab_0 conda-forge
deprecated: 1.2.13-pyh6c4a22f_0 conda-forge
fftw: 3.3.10-nompi_ha7695d1_103 conda-forge
fonttools: 4.35.0-py37h540881e_0 conda-forge
freetype: 2.12.1-hca18f0e_0 conda-forge
gsl: 2.7-he838d99_0 conda-forge
h5py: 3.7.0-nompi_py37hc97082c_100 conda-forge
hdf5: 1.12.1-nompi_h4df4325_104 conda-forge
healpy: 1.16.1-py37hc950561_0 conda-forge
icu: 70.1-h27087fc_0 conda-forge
importlib-metadata: 4.11.4-py37h89c1867_0 conda-forge
importlib_metadata: 4.11.4-hd8ed1ab_0 conda-forge
iniconfig: 1.1.1-pyh9f0ad1d_0 conda-forge
jpeg: 9e-h166bdaf_2 conda-forge
keyutils: 1.6.1-h166bdaf_0 conda-forge
kiwisolver: 1.4.4-py37h7cecad7_0 conda-forge
krb5: 1.19.3-h08a2579_0 conda-forge
lcms2: 2.12-hddcbb42_0 conda-forge
ld_impl_linux-64: 2.36.1-hea4e1c9_2 conda-forge
lerc: 4.0.0-h27087fc_0 conda-forge
libblas: 3.9.0-16_linux64_openblas conda-forge
libbrotlicommon: 1.0.9-h166bdaf_7 conda-forge
libbrotlidec: 1.0.9-h166bdaf_7 conda-forge
libbrotlienc: 1.0.9-h166bdaf_7 conda-forge
libcblas: 3.9.0-16_linux64_openblas conda-forge
libcurl: 7.83.1-h2283fc2_0 conda-forge
libdeflate: 1.13-h166bdaf_0 conda-forge
libedit: 3.1.20191231-he28a2e2_2 conda-forge
libev: 4.33-h516909a_1 conda-forge
libffi: 3.4.2-h7f98852_5 conda-forge
libgcc-ng: 12.1.0-h8d9b700_16 conda-forge
libgfortran-ng: 12.1.0-h69a702a_16 conda-forge
libgfortran5: 12.1.0-hdcd56e2_16 conda-forge
libgomp: 12.1.0-h8d9b700_16 conda-forge
liblapack: 3.9.0-16_linux64_openblas conda-forge
libnghttp2: 1.47.0-hff17c54_1 conda-forge
libnsl: 2.0.0-h7f98852_0 conda-forge
libopenblas: 0.3.21-pthreads_h78a6416_0 conda-forge
libpng: 1.6.37-h753d276_4 conda-forge
libsqlite: 3.39.2-h753d276_1 conda-forge
libssh2: 1.10.0-hf14f497_3 conda-forge
libstdcxx-ng: 12.1.0-ha89aaad_16 conda-forge
libtiff: 4.4.0-h0e0dad5_3 conda-forge
libwebp-base: 1.2.4-h166bdaf_0 conda-forge
libxcb: 1.13-h7f98852_1004 conda-forge
libzlib: 1.2.12-h166bdaf_2 conda-forge
llvm-openmp: 14.0.4-he0ac6c6_0 conda-forge
lz4-c: 1.9.3-h9c3ff4c_1 conda-forge
matplotlib-base: 3.5.2-py37hc347a89_1 conda-forge
munkres: 1.1.4-pyh9f0ad1d_0 conda-forge
ncurses: 6.3-h27087fc_1 conda-forge
numpy: 1.21.6-py37h976b520_0 conda-forge
openjpeg: 2.5.0-h7d73246_1 conda-forge
openssl: 3.0.5-h166bdaf_1 conda-forge
packaging: 21.3-pyhd8ed1ab_0 conda-forge
pillow: 9.2.0-py37h850a105_2 conda-forge
pip: 22.2.2-pyhd8ed1ab_0 conda-forge
pluggy: 1.0.0-py37h89c1867_3 conda-forge
pthread-stubs: 0.4-h36c2ea0_1001 conda-forge
py: 1.11.0-pyh6c4a22f_0 conda-forge
pycparser: 2.21-pyhd8ed1ab_0 conda-forge
pyerfa: 2.0.0.1-py37hda87dfa_2 conda-forge
pyfftw: 0.13.0-py37h28580d9_2 conda-forge
pyparsing: 3.0.9-pyhd8ed1ab_0 conda-forge
pytest: 7.1.2-py37h89c1867_0 conda-forge
pytest-runner: 6.0.0-pyhd8ed1ab_0 conda-forge
python: 3.7.12-hf930737_100_cpython conda-forge
python-dateutil: 2.8.2-pyhd8ed1ab_0 conda-forge
python_abi: 3.7-2_cp37m conda-forge
readline: 8.1.2-h0f457ee_0 conda-forge
scipy: 1.7.3-py37hf2a6cf1_0 conda-forge
setuptools: 65.0.1-py37h89c1867_0 conda-forge
six: 1.16.0-pyh6c4a22f_0 conda-forge
sqlite: 3.39.2-h4ff8645_1 conda-forge
tk: 8.6.12-h27826a3_0 conda-forge
tomli: 2.0.1-pyhd8ed1ab_0 conda-forge
typing-extensions: 4.3.0-hd8ed1ab_0 conda-forge
typing_extensions: 4.3.0-pyha770c72_0 conda-forge
unicodedata2: 14.0.0-py37h540881e_1 conda-forge
wheel: 0.37.1-pyhd8ed1ab_0 conda-forge
wrapt: 1.14.1-py37h540881e_0 conda-forge
xorg-libxau: 1.0.9-h7f98852_0 conda-forge
xorg-libxdmcp: 1.1.3-h7f98852_0 conda-forge
xz: 5.2.6-h166bdaf_0 conda-forge
zipp: 3.8.1-pyhd8ed1ab_0 conda-forge
zlib: 1.2.12-h166bdaf_2 conda-forge
zstd: 1.5.2-h8a70e8d_4 conda-forge
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
export PREFIX=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehol
export SRC_DIR=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/test_tmp
Initializing console.
import: 'aquila_borg'
[INFO ] libLSS version 7c7f8cc68b3557080378aacc7e0375cc495977c9 built-in modules
[INFO S ] Registered forward models:
[INFO S ] 2LPT_CIC, 2LPT_CIC_OPENMP, 2LPT_DOUBLE, 2LPT_NGP, ALTAIR_AP, Downgrade
[INFO S ] EnforceMass, HADES_LOG, HADES_PT, Haar, LPT_CIC, LPT_CIC_OPENMP, LPT_DOUBLE
[INFO S ] LPT_NGP, LPT_NU_CIC, LPT_NU_CIC_OPENMP, PATCH_MODEL, PM_CIC, PM_CIC_OPENMP
[INFO S ] PM_CIC_OPENMP2, PRIMORDIAL, PRIMORDIAL_AS, PRIMORDIAL_FNL, QLPT, QLPT_RSD
[INFO S ] Softplus, TRANSFER_CLASS, TRANSFER_EHU, Transfer, Upgrade, bias::BrokenPowerLaw
[INFO S ] bias::BrokenPowerLawSigmoid, bias::DoubleBrokenPowerLaw, bias::EFT, bias::EFT_Thresh
[INFO S ] bias::Linear, bias::ManyPower_1^1, bias::ManyPower_1^2, bias::ManyPower_1^4
[INFO S ] bias::ManyPower_2^2, bias::Noop, bias::PowerLaw
[INFO S ] Registered forward models (v3):
[INFO S ] KappaSphere
[INFO S ] Registered likelihoods:
[INFO S ] BORG_NULL, BORG_POISSON, BORG_REDUCED_SHEAR, BORG_SHEAR, BORG_STUDENT_T
[INFO S ] EFT_BIAS_LIKE, EFT_BIAS_MARG_LIKE, GAUSSIAN_BROKEN_POWER_LAW_BIAS, GAUSSIAN_LINEAR_BIAS
[INFO S ] GAUSSIAN_MO_WHITE_BIAS, GAUSSIAN_POWER_LAW_BIAS, GENERIC_GAUSSIAN_MANY_POWER_1^1
[INFO S ] GENERIC_GAUSSIAN_MANY_POWER_1^2, GENERIC_POISSON_BROKEN_POWERLAW_BIAS
[INFO S ] GENERIC_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS, GENERIC_POISSON_MANY_POWER_1^1
[INFO S ] GENERIC_POISSON_MANY_POWER_1^2, GENERIC_POISSON_MANY_POWER_1^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MANY_POWER_2^2, GENERIC_POISSON_MANY_POWER_2^2_DEGRADE4
[INFO S ] GENERIC_POISSON_MO_WHITE_BIAS, GENERIC_POISSON_POWERLAW_BIAS, GENERIC_POISSON_POWERLAW_BIAS_DEGRADE4
[INFO S ] HADES_LINEAR, NOOP_POISSON, OCT_LIKELIHOOD, OCT_LIKELIHOOD_MARG, POISSON
[INFO S ] ROBUST_POISSON_BROKEN_POWERLAW_BIAS, ROBUST_POISSON_BROKEN_POWERLAW_SIGMOID_BIAS
[INFO S ] ROBUST_POISSON_MANY_POWER_1^1, ROBUST_POISSON_MANY_POWER_1^2, ROBUST_POISSON_POWERLAW_BIAS
[INFO ] Registering data IO converters
[INFO S ] ARES3 base version 7c7f8cc68b3557080378aacc7e0375cc495977c9
[INFO S ] GIT report
[INFO S ] - Module: root, Version: 7c7f8cc68b3557080378aacc7e0375cc495977c9
[INFO S ] [0m
[INFO S ]
[INFO ] CPU features: MMX [!AVX] [!AVX2] [!AVX512F] SSE SSE2 SSE3 [!SSE4.1] [!SSE4.2] [!AES] [!BMI] [!BMI2]
import: 'aquila_borg'
Resource usage statistics from testing aquila_borg:
Process count: 1
CPU time: Sys=0:00:00.0, User=-
Memory: 3.1M
Disk usage: 32B
Time elapsed: 0:00:02.2
TEST END: /build/jenkins/miniconda3/envs/builder/conda-bld/linux-64/aquila_borg-3.0.1.13-nompi_py37h4f1f353_100.tar.bz2
Renaming work directory '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work' to '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64_main_build_loop'
INFO:conda_build.utils:Renaming work directory '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work' to '/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64_main_build_loop'
shutil.move(work)=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work, dest=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64_main_build_loop)
INFO:conda_build.utils:shutil.move(work)=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work, dest=/build/jenkins/miniconda3/envs/builder/conda-bld/aquila_borg_1660671754668/work_moved_aquila_borg-3.0.1.13-nompi_py37h4f1f353_100_linux-64_main_build_loop)
# Automatic uploading is disabled
# If you want to upload package(s) to anaconda.org later, type:
# To have conda build upload to anaconda.org automatically, use
# conda config --set anaconda_upload yes
anaconda upload \
/build/jenkins/miniconda3/envs/builder/conda-bld/linux-64/aquila_borg-3.0.1.13-nompi_py38h4f1f353_100.tar.bz2 \
/build/jenkins/miniconda3/envs/builder/conda-bld/linux-64/aquila_borg-3.0.1.13-nompi_py37h4f1f353_100.tar.bz2
anaconda_upload is not set. Not uploading wheels: []
INFO :: The inputs making up the hashes for the built packages are as follows:
{
"aquila_borg-3.0.1.13-nompi_py37h4f1f353_100": {
"recipe": {
"boost": "1.77",
"c_compiler": "gcc",
"cxx_compiler": "gxx",
"gsl": "2.7",
"mpi": "nompi",
"numpy": "1.19",
"target_platform": "linux-64"
}
},
"aquila_borg-3.0.1.13-nompi_py38h4f1f353_100": {
"recipe": {
"boost": "1.77",
"c_compiler": "gcc",
"cxx_compiler": "gxx",
"gsl": "2.7",
"mpi": "nompi",
"numpy": "1.19",
"target_platform": "linux-64"
}
}
}
####################################################################################
Resource usage summary:
Total time: 1:15:09.2
CPU usage: sys=0:02:15.1, user=0:45:08.1
Maximum memory usage observed: 2.2G
Total disk usage observed (not including envs): 1.8M
####################################################################################
Source and build intermediates have been left in /build/jenkins/miniconda3/envs/builder/conda-bld.
There are currently 3 accumulated.
To remove them, you can run the ```conda build purge``` command
[Pipeline] }
[Pipeline] // timeout
[Pipeline] }
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 1611986 killed;
[ssh-agent] Stopped.
[Pipeline] // sshagent
[Pipeline] }
[Pipeline] // ansiColor
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy Linux)
[Pipeline] node
Running on ubuntu in /home/jenkins-agent/work/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential jenkins_bitbucket
Fetching changes from the remote Git repository
Fetching without tags
> git rev-parse --resolve-git-dir /home/jenkins-agent/work/workspace/borg_conda_release_3.0/.git # timeout=10
> git config remote.origin.url git@bitbucket.org:aquila-consortium/borg_conda # timeout=10
Fetching upstream changes from git@bitbucket.org:aquila-consortium/borg_conda
> git --version # timeout=10
> git --version # 'git version 2.25.1'
using GIT_SSH to set credentials bitbucket access
Verifying host key using known hosts file, will automatically accept unseen keys
> git fetch --no-tags --force --progress -- git@bitbucket.org:aquila-consortium/borg_conda +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision b8a596cc8719c08ce6595c6362c1756477cd5b8e (release/3.0)
Commit message: "Impose some constraints"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
Warning: A secret was passed to "sh" using Groovy String interpolation, which is insecure.
Affected argument(s) used the following variable(s): [CONDA_DEPLOYER]
See https://jenkins.io/redirect/groovy-string-interpolation for details.
+ . /build/jenkins/miniconda3/envs/builder/bin/activate
++ _CONDA_ROOT=/build/jenkins/miniconda3/envs/builder
++ . /build/jenkins/miniconda3/envs/builder/etc/profile.d/conda.sh
+++ export CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ export _CE_M=
+++ _CE_M=
+++ export _CE_CONDA=
+++ _CE_CONDA=
+++ export CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ '[' -z '' ']'
+++ export CONDA_SHLVL=0
+++ CONDA_SHLVL=0
+++ '[' -n '' ']'
+++++ dirname /build/jenkins/miniconda3/envs/builder/bin/conda
++++ dirname /build/jenkins/miniconda3/envs/builder/bin
+++ PATH=/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export PATH
+++ '[' -z '' ']'
+++ PS1=
++ conda activate
++ local cmd=activate
++ case "$cmd" in
++ __conda_activate activate
++ '[' -n '' ']'
++ local ask_conda
+++ PS1=
+++ __conda_exe shell.posix activate
+++ __add_sys_prefix_to_path
+++ '[' -n '' ']'
++++ dirname /build/jenkins/miniconda3/envs/builder/bin/conda
+++ SYSP=/build/jenkins/miniconda3/envs/builder/bin
++++ dirname /build/jenkins/miniconda3/envs/builder/bin
+++ SYSP=/build/jenkins/miniconda3/envs/builder
+++ '[' -n '' ']'
+++ PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export PATH
+++ /build/jenkins/miniconda3/envs/builder/bin/conda shell.posix activate
++ ask_conda='PS1='\''(base) '\''
export PATH='\''/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin'\''
export CONDA_PREFIX='\''/build/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''base'\''
export CONDA_PROMPT_MODIFIER='\''(base) '\''
export CONDA_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/python'\'''
++ eval 'PS1='\''(base) '\''
export PATH='\''/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin'\''
export CONDA_PREFIX='\''/build/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''base'\''
export CONDA_PROMPT_MODIFIER='\''(base) '\''
export CONDA_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/python'\'''
+++ PS1='(base) '
+++ export PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export CONDA_PREFIX=/build/jenkins/miniconda3/envs/builder
+++ CONDA_PREFIX=/build/jenkins/miniconda3/envs/builder
+++ export CONDA_SHLVL=1
+++ CONDA_SHLVL=1
+++ export CONDA_DEFAULT_ENV=base
+++ CONDA_DEFAULT_ENV=base
+++ export 'CONDA_PROMPT_MODIFIER=(base) '
+++ CONDA_PROMPT_MODIFIER='(base) '
+++ export CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ export _CE_M=
+++ _CE_M=
+++ export _CE_CONDA=
+++ _CE_CONDA=
+++ export CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
++ __conda_hashr
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
+ sh pack_conda.sh /build/jenkins/miniconda3/envs/builder/conda-bld/
> git config core.sparsecheckout # timeout=10
> git checkout -f b8a596cc8719c08ce6595c6362c1756477cd5b8e # timeout=10
+ curl -v -F filename=conda -F file=@conda.tgz http://athos.iap.fr:9595/deploy-conda/****
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0* Trying 194.57.221.134:9595...
* TCP_NODELAY set
* Connected to athos.iap.fr (194.57.221.134) port 9595 (#0)
> POST /deploy-conda/**** HTTP/1.1
> Host: athos.iap.fr:9595
> User-Agent: curl/7.68.0
> Accept: */*
> Content-Length: 43075987
> Content-Type: multipart/form-data; boundary=------------------------6c029c29d44c2511
> Expect: 100-continue
>
* Mark bundle as not supporting multiuse
< HTTP/1.1 100 Continue
} [65536 bytes data]
20 41.0M 0 0 20 8640k 0 49.3M --:--:-- --:--:-- --:--:-- 49.3M* We are completely uploaded and fine
100 41.0M 0 0 100 41.0M 0 20.8M 0:00:01 0:00:01 --:--:-- 20.8M* Mark bundle as not supporting multiuse
< HTTP/1.1 200 OK
< Server: gunicorn/20.0.4
< Date: Tue, 16 Aug 2022 18:57:56 GMT
< Connection: close
< Content-Type: text/html; charset=utf-8
< Content-Length: 2
<
{ [2 bytes data]
100 41.0M 0 2 100 41.0M 0 15.3M 0:00:02 0:00:02 --:--:-- 15.3M
100 41.0M 0 2 100 41.0M 0 15.3M 0:00:02 0:00:02 --:--:-- 15.3M
* Closing connection 0
ok
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy MacOS-M1)
[Pipeline] node
Running on macos-m1 in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential jenkins_bitbucket
Fetching changes from the remote Git repository
Fetching without tags
> git rev-parse --resolve-git-dir /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0/.git # timeout=10
> git config remote.origin.url git@bitbucket.org:aquila-consortium/borg_conda # timeout=10
Fetching upstream changes from git@bitbucket.org:aquila-consortium/borg_conda
> git --version # timeout=10
> git --version # 'git version 2.32.1 (Apple Git-133)'
using GIT_SSH to set credentials bitbucket access
Verifying host key using known hosts file, will automatically accept unseen keys
> git fetch --no-tags --force --progress -- git@bitbucket.org:aquila-consortium/borg_conda +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision b8a596cc8719c08ce6595c6362c1756477cd5b8e (release/3.0)
Commit message: "Impose some constraints"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
Warning: A secret was passed to "sh" using Groovy String interpolation, which is insecure.
Affected argument(s) used the following variable(s): [CONDA_DEPLOYER]
See https://jenkins.io/redirect/groovy-string-interpolation for details.
+ . /Users/jenkins/miniconda3/etc/profile.d/conda.sh
++ export CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
++ '[' -z '' ']'
++ export CONDA_SHLVL=0
++ CONDA_SHLVL=0
++ '[' -n '' ']'
++++ dirname /Users/jenkins/miniconda3/bin/conda
+++ dirname /Users/jenkins/miniconda3/bin
++ PATH=/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ '[' -z '' ']'
++ PS1=
+ sh pack_conda.sh /Users/jenkins/miniconda3/envs/builder/conda-bld/
+ curl -v -F filename=conda -F file=@conda.tgz http://athos.iap.fr:9595/deploy-conda/****
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0* Trying 194.57.221.134:9595...
* Connected to athos.iap.fr (194.57.221.134) port 9595 (#0)
> POST /deploy-conda/**** HTTP/1.1
> Host: athos.iap.fr:9595
> User-Agent: curl/7.79.1
> Accept: */*
> Content-Length: 19584686
> Content-Type: multipart/form-data; boundary=------------------------a13a931864dbe330
> Expect: 100-continue
>
* Mark bundle as not supporting multiuse
< HTTP/1.1 100 Continue
} [65536 bytes data]
> git config core.sparsecheckout # timeout=10
> git checkout -f b8a596cc8719c08ce6595c6362c1756477cd5b8e # timeout=10
* We are completely uploaded and fine
100 18.6M 0 0 100 18.6M 0 12.9M 0:00:01 0:00:01 --:--:-- 13.0M* Mark bundle as not supporting multiuse
< HTTP/1.1 200 OK
< Server: gunicorn/20.0.4
< Date: Tue, 16 Aug 2022 18:58:00 GMT
< Connection: close
< Content-Type: text/html; charset=utf-8
< Content-Length: 2
<
{ [2 bytes data]
100 18.6M 100 2 100 18.6M 1 11.3M 0:00:02 0:00:01 0:00:01 11.4M
* Closing connection 0
ok
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Conda deploy MacOS-x86)
[Pipeline] node
Running on macos-x86 in /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] checkout
Selected Git installation does not exist. Using Default
The recommended git tool is: NONE
using credential jenkins_bitbucket
Fetching changes from the remote Git repository
Fetching without tags
> git rev-parse --resolve-git-dir /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0/.git # timeout=10
> git config remote.origin.url git@bitbucket.org:aquila-consortium/borg_conda # timeout=10
Fetching upstream changes from git@bitbucket.org:aquila-consortium/borg_conda
> git --version # timeout=10
> git --version # 'git version 2.32.1 (Apple Git-133)'
using GIT_SSH to set credentials bitbucket access
Verifying host key using known hosts file, will automatically accept unseen keys
> git fetch --no-tags --force --progress -- git@bitbucket.org:aquila-consortium/borg_conda +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision b8a596cc8719c08ce6595c6362c1756477cd5b8e (release/3.0)
Commit message: "Impose some constraints"
[Pipeline] withEnv
[Pipeline] {
[Pipeline] sh
Warning: A secret was passed to "sh" using Groovy String interpolation, which is insecure.
Affected argument(s) used the following variable(s): [CONDA_DEPLOYER]
See https://jenkins.io/redirect/groovy-string-interpolation for details.
> git config core.sparsecheckout # timeout=10
> git checkout -f b8a596cc8719c08ce6595c6362c1756477cd5b8e # timeout=10
+ . /Users/jenkins-x86/miniconda3/etc/profile.d/conda.sh
++ export CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ '[' -z '' ']'
++ export CONDA_SHLVL=0
++ CONDA_SHLVL=0
++ '[' -n '' ']'
++++ dirname /Users/jenkins-x86/miniconda3/bin/conda
+++ dirname /Users/jenkins-x86/miniconda3/bin
++ PATH=/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ '[' -z '' ']'
++ PS1=
+ sh pack_conda.sh /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/
+ curl -v -F filename=conda -F file=@conda.tgz http://athos.iap.fr:9595/deploy-conda/****
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0* Trying 194.57.221.134:9595...
* Connected to athos.iap.fr (194.57.221.134) port 9595 (#0)
> POST /deploy-conda/**** HTTP/1.1
> Host: athos.iap.fr:9595
> User-Agent: curl/7.79.1
> Accept: */*
> Content-Length: 22183534
> Content-Type: multipart/form-data; boundary=------------------------e24c556e1aae6a0e
> Expect: 100-continue
>
* Mark bundle as not supporting multiuse
< HTTP/1.1 100 Continue
} [65536 bytes data]
52 21.1M 0 0 52 11.1M 0 46.1M --:--:-- --:--:-- --:--:-- 47.4M* We are completely uploaded and fine
100 21.1M 0 0 100 21.1M 0 14.2M 0:00:01 0:00:01 --:--:-- 14.3M
100 21.1M 0 0 100 21.1M 0 8687k 0:00:02 0:00:02 --:--:-- 8710k* Mark bundle as not supporting multiuse
< HTTP/1.1 200 OK
< Server: gunicorn/20.0.4
< Date: Tue, 16 Aug 2022 18:58:07 GMT
< Connection: close
< Content-Type: text/html; charset=utf-8
< Content-Length: 2
<
{ [2 bytes data]
100 21.1M 0 2 100 21.1M 0 8151k 0:00:02 0:00:02 --:--:-- 8171k
* Closing connection 0
ok
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] emailext
Sending email to: webaquila@iap.fr
[Pipeline] node
Running on ubuntu in /home/jenkins-agent/work/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] sh
+ . /build/jenkins/miniconda3/envs/builder/bin/activate
++ _CONDA_ROOT=/build/jenkins/miniconda3/envs/builder
++ . /build/jenkins/miniconda3/envs/builder/etc/profile.d/conda.sh
+++ export CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ export _CE_M=
+++ _CE_M=
+++ export _CE_CONDA=
+++ _CE_CONDA=
+++ export CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ '[' -z '' ']'
+++ export CONDA_SHLVL=0
+++ CONDA_SHLVL=0
+++ '[' -n '' ']'
+++++ dirname /build/jenkins/miniconda3/envs/builder/bin/conda
++++ dirname /build/jenkins/miniconda3/envs/builder/bin
+++ PATH=/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export PATH
+++ '[' -z '' ']'
+++ PS1=
++ conda activate
++ local cmd=activate
++ case "$cmd" in
++ __conda_activate activate
++ '[' -n '' ']'
++ local ask_conda
+++ PS1=
+++ __conda_exe shell.posix activate
+++ __add_sys_prefix_to_path
+++ '[' -n '' ']'
++++ dirname /build/jenkins/miniconda3/envs/builder/bin/conda
+++ SYSP=/build/jenkins/miniconda3/envs/builder/bin
++++ dirname /build/jenkins/miniconda3/envs/builder/bin
+++ SYSP=/build/jenkins/miniconda3/envs/builder
+++ '[' -n '' ']'
+++ PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export PATH
+++ /build/jenkins/miniconda3/envs/builder/bin/conda shell.posix activate
++ ask_conda='PS1='\''(base) '\''
export PATH='\''/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin'\''
export CONDA_PREFIX='\''/build/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''base'\''
export CONDA_PROMPT_MODIFIER='\''(base) '\''
export CONDA_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/python'\'''
++ eval 'PS1='\''(base) '\''
export PATH='\''/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin'\''
export CONDA_PREFIX='\''/build/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''base'\''
export CONDA_PROMPT_MODIFIER='\''(base) '\''
export CONDA_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/build/jenkins/miniconda3/envs/builder/bin/python'\'''
+++ PS1='(base) '
+++ export PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+++ export CONDA_PREFIX=/build/jenkins/miniconda3/envs/builder
+++ CONDA_PREFIX=/build/jenkins/miniconda3/envs/builder
+++ export CONDA_SHLVL=1
+++ CONDA_SHLVL=1
+++ export CONDA_DEFAULT_ENV=base
+++ CONDA_DEFAULT_ENV=base
+++ export 'CONDA_PROMPT_MODIFIER=(base) '
+++ CONDA_PROMPT_MODIFIER='(base) '
+++ export CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ CONDA_EXE=/build/jenkins/miniconda3/envs/builder/bin/conda
+++ export _CE_M=
+++ _CE_M=
+++ export _CE_CONDA=
+++ _CE_CONDA=
+++ export CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
+++ CONDA_PYTHON_EXE=/build/jenkins/miniconda3/envs/builder/bin/python
++ __conda_hashr
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
+ conda build purge
+ local cmd=build
+ case "$cmd" in
+ __conda_exe build purge
+ __add_sys_prefix_to_path
+ '[' -n '' ']'
++ dirname /build/jenkins/miniconda3/envs/builder/bin/conda
+ SYSP=/build/jenkins/miniconda3/envs/builder/bin
++ dirname /build/jenkins/miniconda3/envs/builder/bin
+ SYSP=/build/jenkins/miniconda3/envs/builder
+ '[' -n '' ']'
+ PATH=/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/bin:/build/jenkins/miniconda3/envs/builder/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+ export PATH
+ /build/jenkins/miniconda3/envs/builder/bin/conda build purge
+ rm -fr /Users/jenkins/miniconda3/envs/builder/conda-bld/linux-64
+ rm -f conda.tgz
[Pipeline] }
[Pipeline] // node
[Pipeline] node
Running on macos-x86 in /Users/jenkins-x86/jenkins/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] sh
+ . /Users/jenkins-x86/miniconda3/etc/profile.d/conda.sh
++ export CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ '[' -z '' ']'
++ export CONDA_SHLVL=0
++ CONDA_SHLVL=0
++ '[' -n '' ']'
++++ dirname /Users/jenkins-x86/miniconda3/bin/conda
+++ dirname /Users/jenkins-x86/miniconda3/bin
++ PATH=/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ '[' -z '' ']'
++ PS1=
+ conda activate builder
+ local cmd=activate
+ case "$cmd" in
+ __conda_activate activate builder
+ '[' -n '' ']'
+ local ask_conda
++ PS1=
++ __conda_exe shell.posix activate builder
++ __add_sys_prefix_to_path
++ '[' -n '' ']'
+++ dirname /Users/jenkins-x86/miniconda3/bin/conda
++ SYSP=/Users/jenkins-x86/miniconda3/bin
+++ dirname /Users/jenkins-x86/miniconda3/bin
++ SYSP=/Users/jenkins-x86/miniconda3
++ '[' -n '' ']'
++ PATH=/Users/jenkins-x86/miniconda3/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ /Users/jenkins-x86/miniconda3/bin/conda shell.posix activate builder
+ ask_conda='PS1='\''(builder) '\''
export PATH='\''/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins-x86/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins-x86/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins-x86/miniconda3/bin/python'\'''
+ eval 'PS1='\''(builder) '\''
export PATH='\''/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins-x86/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins-x86/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins-x86/miniconda3/bin/python'\'''
++ PS1='(builder) '
++ export PATH=/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ PATH=/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export CONDA_PREFIX=/Users/jenkins-x86/miniconda3/envs/builder
++ CONDA_PREFIX=/Users/jenkins-x86/miniconda3/envs/builder
++ export CONDA_SHLVL=1
++ CONDA_SHLVL=1
++ export CONDA_DEFAULT_ENV=builder
++ CONDA_DEFAULT_ENV=builder
++ export 'CONDA_PROMPT_MODIFIER=(builder) '
++ CONDA_PROMPT_MODIFIER='(builder) '
++ export CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins-x86/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins-x86/miniconda3/bin/python
+ __conda_hashr
+ '[' -n '' ']'
+ '[' -n '' ']'
+ hash -r
+ conda build purge
+ local cmd=build
+ case "$cmd" in
+ __conda_exe build purge
+ __add_sys_prefix_to_path
+ '[' -n '' ']'
++ dirname /Users/jenkins-x86/miniconda3/bin/conda
+ SYSP=/Users/jenkins-x86/miniconda3/bin
++ dirname /Users/jenkins-x86/miniconda3/bin
+ SYSP=/Users/jenkins-x86/miniconda3
+ '[' -n '' ']'
+ PATH=/Users/jenkins-x86/miniconda3/bin:/Users/jenkins-x86/miniconda3/envs/builder/bin:/Users/jenkins-x86/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
+ export PATH
+ /Users/jenkins-x86/miniconda3/bin/conda build purge
+ rm -fr /Users/jenkins-x86/miniconda3/envs/builder/conda-bld/osx-64
+ rm -f conda.tgz
[Pipeline] }
[Pipeline] // node
[Pipeline] node
Running on macos-m1 in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] sh
+ . /Users/jenkins/miniconda3/etc/profile.d/conda.sh
++ export CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
++ '[' -z '' ']'
++ export CONDA_SHLVL=0
++ CONDA_SHLVL=0
++ '[' -n '' ']'
++++ dirname /Users/jenkins/miniconda3/bin/conda
+++ dirname /Users/jenkins/miniconda3/bin
++ PATH=/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ '[' -z '' ']'
++ PS1=
+ conda activate builder
+ local cmd=activate
+ case "$cmd" in
+ __conda_activate activate builder
+ '[' -n '' ']'
+ local ask_conda
++ PS1=
++ __conda_exe shell.posix activate builder
++ __add_sys_prefix_to_path
++ '[' -n '' ']'
+++ dirname /Users/jenkins/miniconda3/bin/conda
++ SYSP=/Users/jenkins/miniconda3/bin
+++ dirname /Users/jenkins/miniconda3/bin
++ SYSP=/Users/jenkins/miniconda3
++ '[' -n '' ']'
++ PATH=/Users/jenkins/miniconda3/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export PATH
++ /Users/jenkins/miniconda3/bin/conda shell.posix activate builder
+ ask_conda='PS1='\''(builder) '\''
export PATH='\''/Users/jenkins/miniconda3/envs/builder/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins/miniconda3/bin/python'\'''
+ eval 'PS1='\''(builder) '\''
export PATH='\''/Users/jenkins/miniconda3/envs/builder/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin'\''
export CONDA_PREFIX='\''/Users/jenkins/miniconda3/envs/builder'\''
export CONDA_SHLVL='\''1'\''
export CONDA_DEFAULT_ENV='\''builder'\''
export CONDA_PROMPT_MODIFIER='\''(builder) '\''
export CONDA_EXE='\''/Users/jenkins/miniconda3/bin/conda'\''
export _CE_M='\'''\''
export _CE_CONDA='\'''\''
export CONDA_PYTHON_EXE='\''/Users/jenkins/miniconda3/bin/python'\'''
++ PS1='(builder) '
++ export PATH=/Users/jenkins/miniconda3/envs/builder/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ PATH=/Users/jenkins/miniconda3/envs/builder/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
++ export CONDA_PREFIX=/Users/jenkins/miniconda3/envs/builder
++ CONDA_PREFIX=/Users/jenkins/miniconda3/envs/builder
++ export CONDA_SHLVL=1
++ CONDA_SHLVL=1
++ export CONDA_DEFAULT_ENV=builder
++ CONDA_DEFAULT_ENV=builder
++ export 'CONDA_PROMPT_MODIFIER=(builder) '
++ CONDA_PROMPT_MODIFIER='(builder) '
++ export CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ CONDA_EXE=/Users/jenkins/miniconda3/bin/conda
++ export _CE_M=
++ _CE_M=
++ export _CE_CONDA=
++ _CE_CONDA=
++ export CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
++ CONDA_PYTHON_EXE=/Users/jenkins/miniconda3/bin/python
+ __conda_hashr
+ '[' -n '' ']'
+ '[' -n '' ']'
+ hash -r
+ conda build purge
+ local cmd=build
+ case "$cmd" in
+ __conda_exe build purge
+ __add_sys_prefix_to_path
+ '[' -n '' ']'
++ dirname /Users/jenkins/miniconda3/bin/conda
+ SYSP=/Users/jenkins/miniconda3/bin
++ dirname /Users/jenkins/miniconda3/bin
+ SYSP=/Users/jenkins/miniconda3
+ '[' -n '' ']'
+ PATH=/Users/jenkins/miniconda3/bin:/Users/jenkins/miniconda3/envs/builder/bin:/Users/jenkins/miniconda3/condabin:/usr/bin:/bin:/usr/sbin:/sbin
+ export PATH
+ /Users/jenkins/miniconda3/bin/conda build purge
+ rm -fr /Users/jenkins/miniconda3/envs/builder/conda-bld/osx-arm64
+ rm -f conda.tgz
[Pipeline] }
[Pipeline] // node
[Pipeline] node
Running on macos-m1 in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0
[Pipeline] {
[Pipeline] dir
Running in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0/jenkins-borg_conda-release%2F3.0-39
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] dir
Running in /Users/jenkins/jenkins_build/workspace/borg_conda_release_3.0@tmp
[Pipeline] {
[Pipeline] deleteDir
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withCredentials
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/1704ec6c/images/svgs/logo.svg){kind=logo}
